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Phenomenological model of motility by spatiotemporal modulation of active interactions

New journal of physics, 2021-08, Vol.23 (8), p.83001

2021

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Controlling organization and forces in active matter through optically defined boundaries

Nature (London), 2019-08, Vol.572 (7768), p.224-229

2019

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Deep Parallel Characterization of AAV Tropism and AAV-Mediated Transcriptional Changes via Single-Cell RNA Sequencing

Frontiers in immunology, 2021-10, Vol.12, p.730825-730825

2021

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Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing

Cell systems, 2016-04, Vol.2 (4), p.239-250

2016

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Single cell profiling of capillary blood enables out of clinic human immunity studies

Scientific reports, 2020-11, Vol.10 (1), p.20540-20540, Article 20540

2020

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Spin glasses, error correcting codes, and synchronization of human stem cell organoids

Cell, 2023-02, Vol.186 (3), p.461-463

Thomson, Matt

2023

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Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and disease

Nature communications, 2024-09, Vol.15 (1), p.7010-16, Article 7010

2024

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Engineering programmable material-to-cell pathways via synthetic notch receptors to spatially control differentiation in multicellular constructs

Nature communications, 2024-07, Vol.15 (1), p.5891-21, Article 5891

2024

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Author Correction: Engineering programmable material-to-cell pathways via synthetic notch receptors to spatially control differentiation in multicellular constructs

Nature communications, 2024-08, Vol.15 (1), p.6490-1, Article 6490

2024

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Environmental statistics and optimal regulation

PLoS computational biology, 2014-09, Vol.10 (9), p.e1003826-e1003826

2014

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Motor processivity and speed determine structure and dynamics of microtubule-motor assemblies

eLife, 2023-02, Vol.12

2023

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Daily SARS-CoV-2 Nasal Antigen Tests Miss Infected and Presumably Infectious People Due to Viral Load Differences among Specimen Types

Microbiology spectrum, 2023-08, Vol.11 (4), p.e0129523-e0129523

2023

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Transcription Factor Competition Allows Embryonic Stem Cells to Distinguish Authentic Signals from Noise

Cell systems, 2015-08, Vol.1 (2), p.117-129

2015

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Persistent fluid flows defined by active matter boundaries

Communications physics, 2021-08, Vol.4 (1), p.1-9, Article 198

2021

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Automated construction of cognitive maps with visual predictive coding

Nature machine intelligence, 2024-07, Vol.6 (7), p.820-833

2024

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Theoretical limits of energy extraction in active fluids

Physical review research, 2024-05, Vol.6 (2), Article 023195

2024

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Reconstituting the nonequilibrium biophysics of the LECA cytoskeleton in active matter

Biophysical journal, 2022-02, Vol.121 (3), p.521a-521a

2022

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ActiveSVM selects minimal gene sets from gene expression data

Nature Computational Science, 2022-07, Vol.2 (7), p.420-421

2022

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Localization of signaling receptors maximizes cellular information acquisition in spatially structured natural environments

Cell systems, 2022-07, Vol.13 (7), p.530-546.e12

2022

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Developmental clock and mechanism of de novo polarization of the mouse embryo

Science (American Association for the Advancement of Science), 2020-12, Vol.370 (6522)

2020

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Pluripotency Factors in Embryonic Stem Cells Regulate Differentiation into Germ Layers

Cell, 2011-06, Vol.145 (6), p.875-889

2011

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A Utopic Method for English Place-Shaping Visions

Open Library of Humanities, 2018-11, Vol.4 (2)

Thomson, Matt

2018

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Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic references

Nature methods, 2023-10, Vol.20 (10), p.1506-1515

2023

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Reinforcement learning reveals fundamental limits on the mixing of active particles

Soft matter, 2022-01, Vol.18 (3), p.617-625

2022

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Stem cell-derived synthetic embryos self-assemble by exploiting cadherin codes and cortical tension

Nature cell biology, 2022-09, Vol.24 (9), p.1341-1349

2022

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Phenomenological model of motility by spatiotemporal modulation of active interactions

Controlling organization and forces in active matter through optically defined boundaries

Deep Parallel Characterization of AAV Tropism and AAV-Mediated Transcriptional Changes via Single-Cell RNA Sequencing

Low Dimensionality in Gene Expression Data Enables the Accurate Extraction of Transcriptional Programs from Shallow Sequencing

Single cell profiling of capillary blood enables out of clinic human immunity studies

Spin glasses, error correcting codes, and synchronization of human stem cell organoids

Spatial transcriptomics defines injury specific microenvironments and cellular interactions in kidney regeneration and disease

Engineering programmable material-to-cell pathways via synthetic notch receptors to spatially control differentiation in multicellular constructs

Author Correction: Engineering programmable material-to-cell pathways via synthetic notch receptors to spatially control differentiation in multicellular constructs

Environmental statistics and optimal regulation

Motor processivity and speed determine structure and dynamics of microtubule-motor assemblies

Daily SARS-CoV-2 Nasal Antigen Tests Miss Infected and Presumably Infectious People Due to Viral Load Differences among Specimen Types

Transcription Factor Competition Allows Embryonic Stem Cells to Distinguish Authentic Signals from Noise

Persistent fluid flows defined by active matter boundaries

Automated construction of cognitive maps with visual predictive coding

Theoretical limits of energy extraction in active fluids

Reconstituting the nonequilibrium biophysics of the LECA cytoskeleton in active matter

ActiveSVM selects minimal gene sets from gene expression data

Localization of signaling receptors maximizes cellular information acquisition in spatially structured natural environments

Developmental clock and mechanism of de novo polarization of the mouse embryo

Pluripotency Factors in Embryonic Stem Cells Regulate Differentiation into Germ Layers

A Utopic Method for English Place-Shaping Visions

Recovery of missing single-cell RNA-sequencing data with optimized transcriptomic references

Reinforcement learning reveals fundamental limits on the mixing of active particles

Stem cell-derived synthetic embryos self-assemble by exploiting cadherin codes and cortical tension

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