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A Method for Identifying Vesicle Transport Proteins Based on LibSVM and MRMD

Computational and mathematical methods in medicine, 2020, Vol.2020 (2020), p.1-9

2020

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ReRF-Pred: predicting amyloidogenic regions of proteins based on their pseudo amino acid composition and tripeptide composition

BMC bioinformatics, 2021-11, Vol.22 (1), p.1-545, Article 545

2021

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Prediction of microRNAs associated with human diseases based on weighted k most similar neighbors

PloS one, 2013-08, Vol.8 (8), p.e70204-e70204

2013

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Identifying Antioxidant Proteins by Using Amino Acid Composition and Protein-Protein Interactions

Frontiers in cell and developmental biology, 2020-10, Vol.8, p.591487-591487

2020

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iAIPs: Identifying Anti-Inflammatory Peptides Using Random Forest

Frontiers in genetics, 2021-11, Vol.12, p.773202-773202

2021

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iEnhancer-EBLSTM: Identifying Enhancers and Strengths by Ensembles of Bidirectional Long Short-Term Memory

Frontiers in genetics, 2021-03, Vol.12, p.665498-665498

2021

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i6mA-Vote: Cross-Species Identification of DNA N6-Methyladenine Sites in Plant Genomes Based on Ensemble Learning With Voting

Frontiers in plant science, 2022-02, Vol.13, p.845835-845835

2022

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Construction of Complex Features for Computational Predicting ncRNA-Protein Interaction

Frontiers in genetics, 2019-02, Vol.10, p.18-18

2019

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The Classification of Enzymes by Deep Learning

IEEE access, 2020, Vol.8, p.89802-89811

2020

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SMOPredT4SE: An Effective Prediction of Bacterial Type IV Secreted Effectors Using SVM Training With SMO

IEEE access, 2020, Vol.8, p.25570-25578

2020

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Revealing protein functions based on relationships of interacting proteins and GO terms

Journal of biomedical semantics, 2017-09, Vol.8 (Suppl 1), p.27-27, Article 27

2017

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eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform

Scientific reports, 2016-07, Vol.6 (1), p.30595-30595, Article 30595

2016

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Drug repositioning by collaborative learning based on graph convolutional inductive network

Future generation computer systems, 2025-01, Vol.162, p.107491, Article 107491

2025

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Measuring functional similarity of lncRNAs based on variable K-mer profiles of nucleotide sequences

Methods (San Diego, Calif.), 2023-04, Vol.212, p.21-30

2023

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i4mC-EL: Identifying DNA N4-Methylcytosine Sites in the Mouse Genome Using Ensemble Learning

BioMed research international, 2021, Vol.2021, p.1-11

2021

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Mining disease genes using integrated protein–protein interaction and gene–gene co-regulation information

FEBS open bio, 2015-01, Vol.5 (1), p.251-256

2015

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MGCNSS: miRNA-disease association prediction with multi-layer graph convolution and distance-based negative sample selection strategy

Briefings in bioinformatics, 2024-03, Vol.25 (3)

2024

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Constructing discriminative feature space for LncRNA–protein interaction based on deep autoencoder and marginal fisher analysis

Computers in biology and medicine, 2023-05, Vol.157, p.106711-106711, Article 106711

2023

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Correction: Prediction of microRNAs Associated with Human Diseases Based on Weighted k Most Similar Neighbors

PloS one, 2013, Vol.8 (9)

2013

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GOGCN: Graph Convolutional Network on Gene Ontology for Functional Similarity Analysis of Genes

IEEE/ACM transactions on computational biology and bioinformatics, 2023-03, Vol.20 (2), p.1053-1064

2023

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Construct Protein-Protein Interaction Network by Mining Domain-Domain Interactions

哈尔滨工业大学学报（英文版）, 2016-08, Vol.23 (4), p.27-36

2016

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Measuring gene functional similarity based on group-wise comparison of GO terms

Bioinformatics, 2013-06, Vol.29 (11), p.1424-1432

2013

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Computational drug repositioning using meta-path-based semantic network analysis

BMC systems biology, 2018-12, Vol.12 (Suppl 9), p.134-134, Article 134

2018

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PredAmyl-MLP: Prediction of Amyloid Proteins Using Multilayer Perceptron

Computational and mathematical methods in medicine, 2020, Vol.2020 (2020), p.1-12

2020

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An improved method for functional similarity analysis of genes based on Gene Ontology

BMC systems biology, 2016-12, Vol.10 (Suppl 4), p.119-119, Article 119

2016

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A Method for Identifying Vesicle Transport Proteins Based on LibSVM and MRMD

ReRF-Pred: predicting amyloidogenic regions of proteins based on their pseudo amino acid composition and tripeptide composition

Prediction of microRNAs associated with human diseases based on weighted k most similar neighbors

Identifying Antioxidant Proteins by Using Amino Acid Composition and Protein-Protein Interactions

iAIPs: Identifying Anti-Inflammatory Peptides Using Random Forest

iEnhancer-EBLSTM: Identifying Enhancers and Strengths by Ensembles of Bidirectional Long Short-Term Memory

i6mA-Vote: Cross-Species Identification of DNA N6-Methyladenine Sites in Plant Genomes Based on Ensemble Learning With Voting

Construction of Complex Features for Computational Predicting ncRNA-Protein Interaction

The Classification of Enzymes by Deep Learning

SMOPredT4SE: An Effective Prediction of Bacterial Type IV Secreted Effectors Using SVM Training With SMO

Revealing protein functions based on relationships of interacting proteins and GO terms

eSNPO: An eQTL-based SNP Ontology and SNP functional enrichment analysis platform

Drug repositioning by collaborative learning based on graph convolutional inductive network

Measuring functional similarity of lncRNAs based on variable K-mer profiles of nucleotide sequences

i4mC-EL: Identifying DNA N4-Methylcytosine Sites in the Mouse Genome Using Ensemble Learning

Mining disease genes using integrated protein–protein interaction and gene–gene co-regulation information

MGCNSS: miRNA-disease association prediction with multi-layer graph convolution and distance-based negative sample selection strategy

Constructing discriminative feature space for LncRNA–protein interaction based on deep autoencoder and marginal fisher analysis

Correction: Prediction of microRNAs Associated with Human Diseases Based on Weighted k Most Similar Neighbors

GOGCN: Graph Convolutional Network on Gene Ontology for Functional Similarity Analysis of Genes

Construct Protein-Protein Interaction Network by Mining Domain-Domain Interactions

Measuring gene functional similarity based on group-wise comparison of GO terms

Computational drug repositioning using meta-path-based semantic network analysis

PredAmyl-MLP: Prediction of Amyloid Proteins Using Multilayer Perceptron

An improved method for functional similarity analysis of genes based on Gene Ontology

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