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Human Calicivirus Typing tool: A web-based tool for genotyping human norovirus and sapovirus sequences

Journal of clinical virology, 2021-01, Vol.134, p.104718-104718, Article 104718

2021

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Emerging Novel GII.P16 Noroviruses Associated with Multiple Capsid Genotypes

Viruses, 2019-06, Vol.11 (6), p.535

2019

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A Genomic Perspective on Protein Families

Science (American Association for the Advancement of Science), 1997-10, Vol.278 (5338), p.631-637

1997

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Genome of the Extremely Radiation-Resistant Bacterium Deinococcus radiodurans Viewed from the Perspective of Comparative Genomics

Microbiology and Molecular Biology Reviews, 2001-03, Vol.65 (1), p.44-B

2001

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Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

Science (American Association for the Advancement of Science), 1998-10, Vol.282 (5389), p.754-759

1998

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VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data

Microbiology spectrum, 2022-04, Vol.10 (2), p.e0256421-e0256421

2022

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Genome trees constructed using five different approaches suggest new major bacterial clades

BMC evolutionary biology, 2001-10, Vol.1 (1), p.8, Article 8

2001

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The Complete Genome of Hyperthermophile Methanopyrus kandleri AV19 and Monophyly of Archaeal Methanogens

Proceedings of the National Academy of Sciences - PNAS, 2002-04, Vol.99 (7), p.4644-4649

2002

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Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles

Trends in genetics, 1998-11, Vol.14 (11), p.442-444

1998

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The COG database: a tool for genome-scale analysis of protein functions and evolution

Nucleic acids research, 2000-01, Vol.28 (1), p.33-36

2000

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Database resources of the National Center for Biotechnology Information

Nucleic acids research, 2007-01, Vol.35 (Database issue), p.D5-D12

2007

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High-Throughput Next-Generation Sequencing of Polioviruses

Journal of clinical microbiology, 2017-02, Vol.55 (2), p.606-615

2017

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The COG database: an updated version includes eukaryotes

BMC bioinformatics, 2003-09, Vol.4 (1), p.41-41, Article 41

2003

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The COG database: new developments in phylogenetic classification of proteins from complete genomes

Nucleic acids research, 2001-01, Vol.29 (1), p.22-28

2001

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Connected gene neighborhoods in prokaryotic genomes

Nucleic acids research, 2002-05, Vol.30 (10), p.2212-2223

2002

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Constant relative rate of protein evolution and detection of functional diversification among bacterial, archaeal and eukaryotic proteins

Genome biology, 2001-01, Vol.2 (12), p.RESEARCH0053-RESEARCH0053, Article research0053.1

2001

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Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell

Genome research, 1999-07, Vol.9 (7), p.608-628

1999

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Purifying and directional selection in overlapping prokaryotic genes

Trends in genetics, 2002-05, Vol.18 (5), p.228-232

2002

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Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks

Proceedings of the National Academy of Sciences - PNAS, 1994-12, Vol.91 (25), p.12091-12095

1994

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Beyond complete genomes: from sequence to structure and function

Current opinion in structural biology, 1998-06, Vol.8 (3), p.355-363

1998

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Congruent evolution of different classes of non-coding DNA in prokaryotic genomes

Nucleic acids research, 2002-10, Vol.30 (19), p.4264-4271

2002

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Database resources of the National Center for Biotechnology Information

Nucleic acids research, 2008-01, Vol.36 (Database issue), p.D13-D21

2008

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Sequence Similarity Analysis of Escherichia coli Proteins: Functional and Evolutionary Implications

Proceedings of the National Academy of Sciences - PNAS, 1995-12, Vol.92 (25), p.11921-11925

1995

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[9] Applications of network BLAST server

Methods in Enzymology, 1996, Vol.266, p.131-141

1996

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Computer Analysis of Bacterial Haloacid Dehalogenases Defines a Large Superfamily of Hydrolases with Diverse Specificity: Application of an Iterative Approach to Database Search

Journal of molecular biology, 1994-11, Vol.244 (1), p.125-132

1994

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Human Calicivirus Typing tool: A web-based tool for genotyping human norovirus and sapovirus sequences

Emerging Novel GII.P16 Noroviruses Associated with Multiple Capsid Genotypes

A Genomic Perspective on Protein Families

Genome of the Extremely Radiation-Resistant Bacterium Deinococcus radiodurans Viewed from the Perspective of Comparative Genomics

Genome Sequence of an Obligate Intracellular Pathogen of Humans: Chlamydia trachomatis

VPipe: an Automated Bioinformatics Platform for Assembly and Management of Viral Next-Generation Sequencing Data

Genome trees constructed using five different approaches suggest new major bacterial clades

The Complete Genome of Hyperthermophile Methanopyrus kandleri AV19 and Monophyly of Archaeal Methanogens

Evidence for massive gene exchange between archaeal and bacterial hyperthermophiles

The COG database: a tool for genome-scale analysis of protein functions and evolution

Database resources of the National Center for Biotechnology Information

High-Throughput Next-Generation Sequencing of Polioviruses

The COG database: an updated version includes eukaryotes

The COG database: new developments in phylogenetic classification of proteins from complete genomes

Connected gene neighborhoods in prokaryotic genomes

Constant relative rate of protein evolution and detection of functional diversification among bacterial, archaeal and eukaryotic proteins

Comparative genomics of the Archaea (Euryarchaeota): evolution of conserved protein families, the stable core, and the variable shell

Purifying and directional selection in overlapping prokaryotic genes

Detection of conserved segments in proteins: iterative scanning of sequence databases with alignment blocks

Beyond complete genomes: from sequence to structure and function

Congruent evolution of different classes of non-coding DNA in prokaryotic genomes

Database resources of the National Center for Biotechnology Information

Sequence Similarity Analysis of Escherichia coli Proteins: Functional and Evolutionary Implications

[9] Applications of network BLAST server

Computer Analysis of Bacterial Haloacid Dehalogenases Defines a Large Superfamily of Hydrolases with Diverse Specificity: Application of an Iterative Approach to Database Search

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