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Improving protein disorder prediction by deep bidirectional long short-term memory recurrent neural networks

Bioinformatics (Oxford, England), 2017-03, Vol.33 (5), p.685-692

2017

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ProQ3D: improved model quality assessments using deep learning

Bioinformatics (Oxford, England), 2017-05, Vol.33 (10), p.1578-1580

2017

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FATSLiM: a fast and robust software to analyze MD simulations of membranes

Bioinformatics (Oxford, England), 2017-01, Vol.33 (1), p.133-134

2017

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QAcon: single model quality assessment using protein structural and contact information with machine learning techniques

Bioinformatics (Oxford, England), 2017-02, Vol.33 (4), p.586-588

2017

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The Snail repressor recruits EZH2 to specific genomic sites through the enrollment of the lncRNA HOTAIR in epithelial-to-mesenchymal transition

Oncogene, 2017-02, Vol.36 (7), p.942-955

2017

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RBPPred: predicting RNA-binding proteins from sequence using SVM

Bioinformatics (Oxford, England), 2017-03, Vol.33 (6), p.854-862

2017

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PDB2CD: a web-based application for the generation of circular dichroism spectra from protein atomic coordinates

Bioinformatics (Oxford, England), 2017-01, Vol.33 (1), p.56-63

2017

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Seeing the trees through the forest: sequence-based homo- and heteromeric protein-protein interaction sites prediction using random forest

Bioinformatics (Oxford, England), 2017-05, Vol.33 (10), p.1479-1487

2017

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AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides

PloS one, 2015-09, Vol.10 (9), p.e0136990-e0136990

2015

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Allopatry as a gordian knot for taxonomists: patterns of DNA barcode divergence in arctic-alpine lepidoptera

PloS one, 2012-10, Vol.7 (10), p.e47214-e47214

2012

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An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier

Bioinformatics (Oxford, England), 2017-03, Vol.33 (6), p.863-870

2017

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The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures

Bioinformatics (Oxford, England), 2017-03, Vol.33 (6), p.935-937

2017

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A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics

Bioinformatics (Oxford, England), 2017-05, Vol.33 (10), p.1488-1496

2017

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ISPRED4: interaction sites PREDiction in protein structures with a refining grammar model

Bioinformatics (Oxford, England), 2017-06, Vol.33 (11), p.1656-1663

2017

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IRaPPA: information retrieval based integration of biophysical models for protein assembly selection

Bioinformatics (Oxford, England), 2017-06, Vol.33 (12), p.1806-1813

2017

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RADER: a RApid DEcoy Retriever to facilitate decoy based assessment of virtual screening

Bioinformatics (Oxford, England), 2017-04, Vol.33 (8), p.1235-1237

2017

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Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity

Bioinformatics (Oxford, England), 2017-04, Vol.33 (7), p.1014-1020

2017

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Expanding the toolkit for membrane protein modeling in Rosetta

Bioinformatics (Oxford, England), 2017-03, Vol.33 (5), p.754-756

2017

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β-Propeller blades as ancestral peptides in protein evolution

PloS one, 2013-10, Vol.8 (10), p.e77074-e77074

2013

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Comparing co-evolution methods and their application to template-free protein structure prediction

Bioinformatics (Oxford, England), 2017-02, Vol.33 (3), p.373-381

2017

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The structural bioinformatics library: modeling in biomolecular science and beyond

Bioinformatics (Oxford, England), 2017-04, Vol.33 (7), p.997-1004

2017

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Characterization of transcriptional complexity during longissimus muscle development in bovines using high-throughput sequencing

PloS one, 2013-06, Vol.8 (6), p.e64356-e64356

2013

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Prediction of aptamer-target interacting pairs with pseudo-amino acid composition

PloS one, 2014-01, Vol.9 (1), p.e86729-e86729

2014

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De novo transcriptome of safflower and the identification of putative genes for oleosin and the biosynthesis of flavonoids

PloS one, 2012-02, Vol.7 (2), p.e30987-e30987

2012

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Outcome Measures and Innovative Approaches in Rehabilitation

2024

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Improving protein disorder prediction by deep bidirectional long short-term memory recurrent neural networks

ProQ3D: improved model quality assessments using deep learning

FATSLiM: a fast and robust software to analyze MD simulations of membranes

QAcon: single model quality assessment using protein structural and contact information with machine learning techniques

The Snail repressor recruits EZH2 to specific genomic sites through the enrollment of the lncRNA HOTAIR in epithelial-to-mesenchymal transition

RBPPred: predicting RNA-binding proteins from sequence using SVM

PDB2CD: a web-based application for the generation of circular dichroism spectra from protein atomic coordinates

Seeing the trees through the forest: sequence-based homo- and heteromeric protein-protein interaction sites prediction using random forest

AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides

Allopatry as a gordian knot for taxonomists: patterns of DNA barcode divergence in arctic-alpine lepidoptera

An ensemble approach to protein fold classification by integration of template-based assignment and support vector machine classifier

The PPI3D web server for searching, analyzing and modeling protein-protein interactions in the context of 3D structures

A DNA intercalation methodology for an efficient prediction of ligand binding pose and energetics

ISPRED4: interaction sites PREDiction in protein structures with a refining grammar model

IRaPPA: information retrieval based integration of biophysical models for protein assembly selection

RADER: a RApid DEcoy Retriever to facilitate decoy based assessment of virtual screening

Cross-React: a new structural bioinformatics method for predicting allergen cross-reactivity

Expanding the toolkit for membrane protein modeling in Rosetta

β-Propeller blades as ancestral peptides in protein evolution

Comparing co-evolution methods and their application to template-free protein structure prediction

The structural bioinformatics library: modeling in biomolecular science and beyond

Characterization of transcriptional complexity during longissimus muscle development in bovines using high-throughput sequencing

Prediction of aptamer-target interacting pairs with pseudo-amino acid composition

De novo transcriptome of safflower and the identification of putative genes for oleosin and the biosynthesis of flavonoids

Outcome Measures and Innovative Approaches in Rehabilitation

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