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The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

PloS one, 2016-01, Vol.11 (1), p.e0147101-e0147101

2016

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Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions

BMC bioinformatics, 2010-09, Vol.11 (1), p.461-461, Article 461

2010

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Source attribution of human campylobacteriosis at the point of exposure by combining comparative exposure assessment and subtype comparison based on comparative genomic fingerprinting

PloS one, 2017-08, Vol.12 (8), p.e0183790

2017

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Whole-Genome Sequencing in Epidemiology of Campylobacter jejuni Infections

Journal of clinical microbiology, 2017-05, Vol.55 (5), p.1269-1275

2017

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Epidemiology of antimicrobial resistant Campylobacter spp. isolated from retail meats in Canada

International journal of food microbiology, 2017-07, Vol.253, p.43-47

2017

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A systematic review characterizing on-farm sources of Campylobacter spp. for broiler chickens

PloS one, 2014-08, Vol.9 (8), p.e104905-e104905

2014

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Integrating Whole-Genome Sequencing Data Into Quantitative Risk Assessment of Foodborne Antimicrobial Resistance: A Review of Opportunities and Challenges

Frontiers in microbiology, 2019-05, Vol.10, p.1107

2019

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A strain comparison of Campylobacter isolated from retail poultry and human clinical cases in Atlantic Canada

PloS one, 2019-05, Vol.14 (5), p.e0215928

2019

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Frequent Implication of Multistress-Tolerant Campylobacter jejuni in Human Infections

Emerging infectious diseases, 2018-06, Vol.24 (6), p.1037-1044

2018

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Rates of fluoroquinolone resistance in domestically acquired Campylobacter jejuni are increasing in people living within a model study location in Canada

Canadian journal of microbiology, 2021-01, Vol.67 (1), p.37-52

2021

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Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

Frontiers in microbiology, 2017-05, Vol.8, p.909-909

2017

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Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli

Frontiers in microbiology, 2021-11, Vol.12, p.776967-776967

2021

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Subtype-Specific Selection for Resistance to Fluoroquinolones but Not to Tetracyclines Is Evident in Campylobacter jejuni Isolates from Beef Cattle in Confined Feeding Operations in Southern Alberta, Canada

Applied and environmental microbiology, 2018-04, Vol.84 (7), p.e02713-17

2018

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Comparative variation within the genome of Campylobacter jejuni NCTC 11168 in human and murine hosts

PloS one, 2014-02, Vol.9 (2), p.e88229-e88229

2014

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The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

Frontiers in microbiology, 2017-06, Vol.8, p.1044-1044

2017

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Molecular Epidemiological Evidence Implicates Cattle as a Primary Reservoir of Campylobacter jejuni Infecting People via Contaminated Chickens

Pathogens (Basel), 2022-11, Vol.11 (11), p.1366

2022

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Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population

BMC genomics, 2016-12, Vol.17 (1), p.990-990, Article 990

2016

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Clinically Relevant Campylobacter jejuni Subtypes Are Readily Found and Transmitted within the Cattle Production Continuum but Present a Limited Foodborne Risk

Applied and environmental microbiology, 2020-03, Vol.86 (6)

2020

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Comparative Detection and Quantification of Arcobacter butzleri in Stools from Diarrheic and Nondiarrheic People in Southwestern Alberta, Canada

Journal of clinical microbiology, 2016-04, Vol.54 (4), p.1082-1088

2016

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Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i

Scientific reports, 2018-10, Vol.8 (1), p.15251-12, Article 15251

2018

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Detection of genetic diversity in Campylobacter jejuni isolated from a commercial turkey flock using flaA typing, MLST analysis and microarray assay

PloS one, 2013-02, Vol.8 (2), p.e51582-e51582

2013

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Current methods for molecular typing of Campylobacter species

Journal of microbiological methods, 2013-10, Vol.95 (1), p.24-31

2013

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Adolescent Social Networks and Physical Intimate Partner Violence Among Colombian Rural Adolescents

Journal of aggression, maltreatment & trauma, 2024-03, Vol.33 (3), p.311-333

2024

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In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence

BMC genomics, 2009-06, Vol.10 (1), p.287-287, Article 287

2009

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Analysis of Campylobacter jejuni Subtype Distribution in the Chicken Broiler Production Continuum: a Longitudinal Examination To Identify Primary Contamination Points

Applied and environmental microbiology, 2021-01, Vol.87 (3), p.1

2021

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The Salmonella In Silico Typing Resource (SISTR): An Open Web-Accessible Tool for Rapidly Typing and Subtyping Draft Salmonella Genome Assemblies

Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions

Source attribution of human campylobacteriosis at the point of exposure by combining comparative exposure assessment and subtype comparison based on comparative genomic fingerprinting

Whole-Genome Sequencing in Epidemiology of Campylobacter jejuni Infections

Epidemiology of antimicrobial resistant Campylobacter spp. isolated from retail meats in Canada

A systematic review characterizing on-farm sources of Campylobacter spp. for broiler chickens

Integrating Whole-Genome Sequencing Data Into Quantitative Risk Assessment of Foodborne Antimicrobial Resistance: A Review of Opportunities and Challenges

A strain comparison of Campylobacter isolated from retail poultry and human clinical cases in Atlantic Canada

Frequent Implication of Multistress-Tolerant Campylobacter jejuni in Human Infections

Rates of fluoroquinolone resistance in domestically acquired Campylobacter jejuni are increasing in people living within a model study location in Canada

Food Safety in the Age of Next Generation Sequencing, Bioinformatics, and Open Data Access

Systematic Evaluation of Whole-Genome Sequencing Based Prediction of Antimicrobial Resistance in Campylobacter jejuni and C. coli

Subtype-Specific Selection for Resistance to Fluoroquinolones but Not to Tetracyclines Is Evident in Campylobacter jejuni Isolates from Beef Cattle in Confined Feeding Operations in Southern Alberta, Canada

Comparative variation within the genome of Campylobacter jejuni NCTC 11168 in human and murine hosts

The Validation and Implications of Using Whole Genome Sequencing as a Replacement for Traditional Serotyping for a National Salmonella Reference Laboratory

Molecular Epidemiological Evidence Implicates Cattle as a Primary Reservoir of Campylobacter jejuni Infecting People via Contaminated Chickens

Genomic insights from whole genome sequencing of four clonal outbreak Campylobacter jejuni assessed within the global C. jejuni population

Clinically Relevant Campylobacter jejuni Subtypes Are Readily Found and Transmitted within the Cattle Production Continuum but Present a Limited Foodborne Risk

Comparative Detection and Quantification of Arcobacter butzleri in Stools from Diarrheic and Nondiarrheic People in Southwestern Alberta, Canada

Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i

Detection of genetic diversity in Campylobacter jejuni isolated from a commercial turkey flock using flaA typing, MLST analysis and microarray assay

Current methods for molecular typing of Campylobacter species

Adolescent Social Networks and Physical Intimate Partner Violence Among Colombian Rural Adolescents

In silico genomic analyses reveal three distinct lineages of Escherichia coli O157:H7, one of which is associated with hyper-virulence

Analysis of Campylobacter jejuni Subtype Distribution in the Chicken Broiler Production Continuum: a Longitudinal Examination To Identify Primary Contamination Points

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