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Enhancements of the Gaussian network model in describing nucleotide residue fluctuations for RNA

Chinese physics B, 2021-05, Vol.30 (5), p.58701-205

2021

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Force-constant-decayed anisotropic network model: An improved method for predicting RNA flexibility

Chinese physics B, 2022-06, Vol.31 (6), p.68704-877

2022

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A mosaic-type trimeric RBD-based COVID-19 vaccine candidate induces potent neutralization against Omicron and other SARS-CoV-2 variants

eLife, 2022-08, Vol.11

2022

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Identification of key residues in protein functional movements by using molecular dynamics simulations combined with a perturbation-response scanning method

Chinese physics B, 2021-10, Vol.30 (10), p.108701-672

2021

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Identification of key sites controlling protein functional motions by using elastic network model combined with internal coordinates

The Journal of chemical physics, 2019-07, Vol.151 (4), p.045101-045101

2019

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Design of a mutation-integrated trimeric RBD with broad protection against SARS-CoV-2

Cell discovery, 2022-02, Vol.8 (1), p.17-17, Article 17

2022

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Domain Motions and Functionally-Key Residues of L-Alanine Dehydrogenase Revealed by an Elastic Network Model

International journal of molecular sciences, 2015-12, Vol.16 (12), p.29383-29397

2015

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The Intrinsic Dynamics and Unfolding Process of an Antibody Fab Fragment Revealed by Elastic Network Model

International journal of molecular sciences, 2015-12, Vol.16 (12), p.29720-29731

2015

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Prediction of mutation-induced protein stability changes based on the geometric representations learned by a self-supervised method

BMC bioinformatics, 2024-08, Vol.25 (1), p.282-19, Article 282

2024

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Conformational Motions and Functionally Key Residues for Vitamin B12 Transporter BtuCD-BtuF Revealed by Elastic Network Model with a Function-Related Internal Coordinate

International journal of molecular sciences, 2015-08, Vol.16 (8), p.17933-17951

2015

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Mutating a flexible region of the RSV F protein can stabilize the prefusion conformation

Science (American Association for the Advancement of Science), 2024-09, Vol.385 (6716), p.1484-1491

2024

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The functional motions and related key residues behind the uncoating of coxsackievirus A16

Proteins, structure, function, and bioinformatics, 2021-10, Vol.89 (10), p.1365-1375

2021

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Effects of ligand binding on the mechanical stability of protein GB1 studied by steered molecular dynamics simulation

Journal of molecular modeling, 2016-08, Vol.22 (8), p.188-9, Article 188

2016

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Safety and immunogenicity of a hybrid-type vaccine booster in BBIBP-CorV recipients in a randomized phase 2 trial

Nature communications, 2022-06, Vol.13 (1), p.3654-3654, Article 3654

2022

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Analysis of Domain Movements in Glutamine-Binding Protein with Simple Models

Biophysical journal, 2007-02, Vol.92 (4), p.1326-1335

2007

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Computational studies on the interactions of nanomaterials with proteins and their impacts

Chinese physics B, 2015-12, Vol.24 (12), p.8-15

安德义苏计国李春华李敬源

2015

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Enhancement of protein mechanical stability: Correlated deformations are handcuffed by ligand binding

The Journal of chemical physics, 2019-04, Vol.150 (15), p.155102-155102

2019

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Evolution of the interactions between GII.4 noroviruses and histo-blood group antigens: Insights from experimental and computational studies

PLoS pathogens, 2021-07, Vol.17 (7), p.e1009745

2021

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Energy transport pathway in proteins: Insights from non-equilibrium molecular dynamics with elastic network model

Scientific reports, 2018-06, Vol.8 (1), p.9487-13, Article 9487

2018

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Immunogenicity and safety of NVSI-06-07 as a heterologous booster after priming with BBIBP-CorV: a phase 2 trial

Signal transduction and targeted therapy, 2022-06, Vol.7 (1), p.172-172, Article 172

2022

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Reverse Virtual Screening on Persistent Organic Pollutants 4,4'-DDE and CB-153

Wuli huaxue xuebao, 2013-10, Vol.29 (10), p.2276-2285

2013

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Design of hepadnavirus core protein-based chimeric virus-like particles carrying epitopes from respiratory syncytial virus

npj vaccines, 2024-03, Vol.9 (1), p.62-62, Article 62

2024

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Allosteric transitions of the maltose transporter studied by an elastic network model

Biopolymers, 2014-07, Vol.101 (7), p.758-768

2014

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Protein Unfolding Behavior Studied by Elastic Network Model

Biophysical journal, 2008-06, Vol.94 (12), p.4586-4596

2008

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Safety and immunogenicity of a mosaic vaccine booster against Omicron and other SARS-CoV-2 variants: a randomized phase 2 trial

Signal transduction and targeted therapy, 2023-01, Vol.8 (1), p.20-20, Article 20

2023

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Enhancements of the Gaussian network model in describing nucleotide residue fluctuations for RNA

Force-constant-decayed anisotropic network model: An improved method for predicting RNA flexibility

A mosaic-type trimeric RBD-based COVID-19 vaccine candidate induces potent neutralization against Omicron and other SARS-CoV-2 variants

Identification of key residues in protein functional movements by using molecular dynamics simulations combined with a perturbation-response scanning method

Identification of key sites controlling protein functional motions by using elastic network model combined with internal coordinates

Design of a mutation-integrated trimeric RBD with broad protection against SARS-CoV-2

Domain Motions and Functionally-Key Residues of L-Alanine Dehydrogenase Revealed by an Elastic Network Model

The Intrinsic Dynamics and Unfolding Process of an Antibody Fab Fragment Revealed by Elastic Network Model

Prediction of mutation-induced protein stability changes based on the geometric representations learned by a self-supervised method

Conformational Motions and Functionally Key Residues for Vitamin B12 Transporter BtuCD-BtuF Revealed by Elastic Network Model with a Function-Related Internal Coordinate

Mutating a flexible region of the RSV F protein can stabilize the prefusion conformation

The functional motions and related key residues behind the uncoating of coxsackievirus A16

Effects of ligand binding on the mechanical stability of protein GB1 studied by steered molecular dynamics simulation

Safety and immunogenicity of a hybrid-type vaccine booster in BBIBP-CorV recipients in a randomized phase 2 trial

Analysis of Domain Movements in Glutamine-Binding Protein with Simple Models

Computational studies on the interactions of nanomaterials with proteins and their impacts

Enhancement of protein mechanical stability: Correlated deformations are handcuffed by ligand binding

Evolution of the interactions between GII.4 noroviruses and histo-blood group antigens: Insights from experimental and computational studies

Energy transport pathway in proteins: Insights from non-equilibrium molecular dynamics with elastic network model

Immunogenicity and safety of NVSI-06-07 as a heterologous booster after priming with BBIBP-CorV: a phase 2 trial

Reverse Virtual Screening on Persistent Organic Pollutants 4,4'-DDE and CB-153

Design of hepadnavirus core protein-based chimeric virus-like particles carrying epitopes from respiratory syncytial virus

Allosteric transitions of the maltose transporter studied by an elastic network model

Protein Unfolding Behavior Studied by Elastic Network Model

Safety and immunogenicity of a mosaic vaccine booster against Omicron and other SARS-CoV-2 variants: a randomized phase 2 trial

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