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The evolution of the phage shock protein response system: interplay between protein function, genomic organization, and system function

Molecular biology and evolution, 2011-03, Vol.28 (3), p.1141-1155

2011

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Phylodynamics for cell biologists

Science (American Association for the Advancement of Science), 2021-01, Vol.371 (6526)

2021

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Systems biology (un)certainties

Science (American Association for the Advancement of Science), 2015-10, Vol.350 (6259), p.386-388

2015

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SNPSTR: a database of compound microsatellite-SNP markers

Nucleic acids research, 2007-01, Vol.35 (Database issue), p.D71-D75

2007

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Assessing Coverage of Protein Interaction Data Using Capture–Recapture Models

Bulletin of mathematical biology, 2012-02, Vol.74 (2), p.356-374

2012

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Probability models for degree distributions of protein interaction networks

Europhysics letters, 2005-07, Vol.71 (1), p.152-158

2005

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Construction of quasipotentials for stochastic dynamical systems: An optimization approach

Physical review. E, 2018-08, Vol.98 (2-1), p.022136-022136, Article 022136

2018

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Handbook of Statistical Systems Biology

1. Aufl., 2011

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Genetic diversity and models of viral evolution for the hepatitis C virus

FEMS microbiology letters, 2002-09, Vol.214 (2), p.143-152

2002

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Systems biology (un)certainties: How can modelers restore confidence in systems and computational biology?

Science (American Association for the Advancement of Science), 2015-10, Vol.350 (6259), p.386-388

2015

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Protein–protein interactions: from global to local analyses

Current opinion in biotechnology, 2008-08, Vol.19 (4), p.396-403

2008

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SYSTEMS BIOLOGY. Systems biology (un)certainties

Science (American Association for the Advancement of Science), 2015-10, Vol.350 (6259), p.386-388

2015

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Introduction: genetic variation and human health

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2005-08, Vol.360 (1460), p.1539-1541

2005

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Thermal evolution of hole dynamics in the large-dimensional t-J model

The European physical journal. B, Condensed matter physics, 1999-04, Vol.8 (3), p.377-387

1999

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Finite-temperature hole dynamics in the t − J model: Exact results for high dimensions

Europhysics letters, 1998-07, Vol.43 (2), p.207-212

1998

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A large fraction of HLA class I ligands are proteasome-generated spliced peptides

Science (American Association for the Advancement of Science), 2016-10, Vol.354 (6310), p.354-358

2016

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Gaining confidence in inferred networks

Scientific reports, 2022-02, Vol.12 (1), p.2394-2394, Article 2394

2022

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Proteasome isoforms exhibit only quantitative differences in cleavage and epitope generation

European journal of immunology, 2014-12, Vol.44 (12), p.3508-3521

2014

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Subnets of Scale-Free Networks Are Not Scale-Free: Sampling Properties of Networks

Proceedings of the National Academy of Sciences - PNAS, 2005-03, Vol.102 (12), p.4221-4224

2005

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Cohesin couples transcriptional bursting probabilities of inducible enhancers and promoters

Nature communications, 2022-07, Vol.13 (1), p.4342-16, Article 4342

2022

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Balancing Selection at the Prion Protein Gene Consistent with Prehistoric Kurulike Epidemics

Science (American Association for the Advancement of Science), 2003-04, Vol.300 (5619), p.640-643

2003

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Ecophysiological Examination of the Lake Erie Microcystis Bloom in 2014: Linkages between Biology and the Water Supply Shutdown of Toledo, OH

Environmental science & technology, 2017-06, Vol.51 (12), p.6745-6755

2017

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HyperGraphs.jl: representing higher-order relationships in Julia

Bioinformatics, 2022-07, Vol.38 (14), p.3660-3661

2022

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Gene Expression Profiles of Blumeria graminis Indicate Dynamic Changes to Primary Metabolism during Development of an Obligate Biotrophic Pathogen

The Plant cell, 2005-07, Vol.17 (7), p.2107-2122

2005

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Identification of SARS-CoV-2 spike mutations that attenuate monoclonal and serum antibody neutralization

Cell host & microbe, 2021-03, Vol.29 (3), p.477-488.e4

2021

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The evolution of the phage shock protein response system: interplay between protein function, genomic organization, and system function

Phylodynamics for cell biologists

Systems biology (un)certainties

SNPSTR: a database of compound microsatellite-SNP markers

Assessing Coverage of Protein Interaction Data Using Capture–Recapture Models

Probability models for degree distributions of protein interaction networks

Construction of quasipotentials for stochastic dynamical systems: An optimization approach

Handbook of Statistical Systems Biology

Genetic diversity and models of viral evolution for the hepatitis C virus

Systems biology (un)certainties: How can modelers restore confidence in systems and computational biology?

Protein–protein interactions: from global to local analyses

SYSTEMS BIOLOGY. Systems biology (un)certainties

Introduction: genetic variation and human health

Thermal evolution of hole dynamics in the large-dimensional t-J model

Finite-temperature hole dynamics in the t − J model: Exact results for high dimensions

A large fraction of HLA class I ligands are proteasome-generated spliced peptides

Gaining confidence in inferred networks

Proteasome isoforms exhibit only quantitative differences in cleavage and epitope generation

Subnets of Scale-Free Networks Are Not Scale-Free: Sampling Properties of Networks

Cohesin couples transcriptional bursting probabilities of inducible enhancers and promoters

Balancing Selection at the Prion Protein Gene Consistent with Prehistoric Kurulike Epidemics

Ecophysiological Examination of the Lake Erie Microcystis Bloom in 2014: Linkages between Biology and the Water Supply Shutdown of Toledo, OH

HyperGraphs.jl: representing higher-order relationships in Julia

Gene Expression Profiles of Blumeria graminis Indicate Dynamic Changes to Primary Metabolism during Development of an Obligate Biotrophic Pathogen

Identification of SARS-CoV-2 spike mutations that attenuate monoclonal and serum antibody neutralization

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