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The Sol Genomics Network (SGN)--from genotype to phenotype to breeding

Nucleic acids research, 2015-01, Vol.43 (Database issue), p.D1036-D1041

2015

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Loss of CRWN Nuclear Proteins Induces Cell Death and Salicylic Acid Defense Signaling

Plant physiology (Bethesda), 2019-04, Vol.179 (4), p.1315-1329

2019

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Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding

Nature communications, 2020-11, Vol.11 (1), p.5817-5817, Article 5817

2020

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Characterizing serotonin biosynthesis in Setaria viridis leaves and its effect on aphids

Plant molecular biology, 2022-07, Vol.109 (4-5), p.533-549

2022

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Natural variation for unusual host responses and flagellin-mediated immunity against Pseudomonas syringae in genetically diverse tomato accessions

The New phytologist, 2019-07, Vol.223 (1), p.447-461

2019

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The Ptr1 Locus of Solanum lycopersicoides Confers Resistance to Race 1 Strains of Pseudomonas syringae pv. tomato and to Ralstonia pseudosolanacearum by Recognizing the Type III Effectors AvrRpt2 and RipBN

Molecular plant-microbe interactions, 2019-08, Vol.32 (8), p.949-960

2019

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De Novo Genome Sequence Assembly of Dwarf Coconut ( Cocos nucifera L. 'Catigan Green Dwarf') Provides Insights into Genomic Variation Between Coconut Types and Related Palm Species

G3 : genes - genomes - genetics, 2019-08, Vol.9 (8), p.2377-2393

2019

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Tomato receptor FLAGELLIN-SENSING 3 binds flgII-28 and activates the plant immune system

Nature plants, 2016-08, Vol.2 (9), p.16128, Article 16128

2016

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Independent evolution of ancestral and novel defenses in a genus of toxic plants ( Erysimum , Brassicaceae)

eLife, 2020-04, Vol.9

2020

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ChloroSeq, an Optimized Chloroplast RNA-Seq Bioinformatic Pipeline, Reveals Remodeling of the Organellar Transcriptome Under Heat Stress

G3 : genes - genomes - genetics, 2016-09, Vol.6 (9), p.2817-2827

2016

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Sequencing‐Based Bin Map Construction of a Tomato Mapping Population, Facilitating High‐Resolution Quantitative Trait Loci Detection

The plant genome, 2019-03, Vol.12 (1), p.1-14

2019

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PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing

Genome biology and evolution, 2018-09, Vol.10 (9), p.2501-2517

2018

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Transcriptome Analysis of Melocactus glaucescens (Cactaceae) Reveals Metabolic Changes During in vitro Shoot Organogenesis Induction

Frontiers in plant science, 2021-08, Vol.12, p.697556-697556

2021

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Designing a transcriptome next-generation sequencing project for a nonmodel plant species

American journal of botany, 2012-02, Vol.99 (2), p.257-266

2012

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Aphid Resistance Segregates Independently of Cardenolide and Glucosinolate Content in an Erysimum cheiranthoides (Wormseed Wallflower) F2 Population

Plants (Basel), 2024-02, Vol.13 (4), p.466

2024

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Balancing read length and sequencing depth: Optimizing Nanopore long‐read sequencing for monocots with an emphasis on the Liliales

Applications in plant sciences, 2023-05, Vol.11 (3), p.e11524-n/a

2023

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Genome sequence for the blue‐flowered Andean shrub Iochroma cyaneum reveals extensive discordance across the berry clade of Solanaceae

The plant genome, 2022-09, Vol.15 (3), p.e20223-n/a

2022

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Rapid defense responses in maize leaves induced by Spodoptera exigua caterpillar feeding

Journal of experimental botany, 2017-07, Vol.68 (16), p.4709-4723

2017

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Ptr1 evolved convergently with RPS2 and Mr5 to mediate recognition of AvrRpt2 in diverse solanaceous species

The Plant journal : for cell and molecular biology, 2020-08, Vol.103 (4), p.1433-1445

2020

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Comparative genomics and phylogenetic discordance of cultivated tomato and close wild relatives

PeerJ (San Francisco, CA), 2015-02, Vol.3, p.e793-e793

2015

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Advances in tomato research in the post-genome era

Plant Biotechnology, 2013/09/25, Vol.30(3), pp.243-256

2013

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CFM1, a member of the CRM‐domain protein family, functions in chloroplast group II intron splicing in Setaria viridis

The Plant journal : for cell and molecular biology, 2021-02, Vol.105 (3), p.639-648

2021

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Chromosomal evolution, environmental heterogeneity, and migration drive spatial patterns of species richness in Calochortus (Liliaceae)

Proceedings of the National Academy of Sciences - PNAS, 2024-03, Vol.121 (10), p.e2305228121

2024

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Differential regulation of caffeine metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta)

Planta, 2015-01, Vol.241 (1), p.179-191

2015

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A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity

The Plant journal : for cell and molecular biology, 2022-06, Vol.110 (6), p.1791-1810

2022

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The Sol Genomics Network (SGN)--from genotype to phenotype to breeding

Loss of CRWN Nuclear Proteins Induces Cell Death and Salicylic Acid Defense Signaling

Genome of Solanum pimpinellifolium provides insights into structural variants during tomato breeding

Characterizing serotonin biosynthesis in Setaria viridis leaves and its effect on aphids

Natural variation for unusual host responses and flagellin-mediated immunity against Pseudomonas syringae in genetically diverse tomato accessions

The Ptr1 Locus of Solanum lycopersicoides Confers Resistance to Race 1 Strains of Pseudomonas syringae pv. tomato and to Ralstonia pseudosolanacearum by Recognizing the Type III Effectors AvrRpt2 and RipBN

De Novo Genome Sequence Assembly of Dwarf Coconut ( Cocos nucifera L. 'Catigan Green Dwarf') Provides Insights into Genomic Variation Between Coconut Types and Related Palm Species

Tomato receptor FLAGELLIN-SENSING 3 binds flgII-28 and activates the plant immune system

Independent evolution of ancestral and novel defenses in a genus of toxic plants ( Erysimum , Brassicaceae)

ChloroSeq, an Optimized Chloroplast RNA-Seq Bioinformatic Pipeline, Reveals Remodeling of the Organellar Transcriptome Under Heat Stress

Sequencing‐Based Bin Map Construction of a Tomato Mapping Population, Facilitating High‐Resolution Quantitative Trait Loci Detection

PacBio-Based Mitochondrial Genome Assembly of Leucaena trichandra (Leguminosae) and an Intrageneric Assessment of Mitochondrial RNA Editing

Transcriptome Analysis of Melocactus glaucescens (Cactaceae) Reveals Metabolic Changes During in vitro Shoot Organogenesis Induction

Designing a transcriptome next-generation sequencing project for a nonmodel plant species

Aphid Resistance Segregates Independently of Cardenolide and Glucosinolate Content in an Erysimum cheiranthoides (Wormseed Wallflower) F2 Population

Balancing read length and sequencing depth: Optimizing Nanopore long‐read sequencing for monocots with an emphasis on the Liliales

Genome sequence for the blue‐flowered Andean shrub Iochroma cyaneum reveals extensive discordance across the berry clade of Solanaceae

Rapid defense responses in maize leaves induced by Spodoptera exigua caterpillar feeding

Ptr1 evolved convergently with RPS2 and Mr5 to mediate recognition of AvrRpt2 in diverse solanaceous species

Comparative genomics and phylogenetic discordance of cultivated tomato and close wild relatives

Advances in tomato research in the post-genome era

CFM1, a member of the CRM‐domain protein family, functions in chloroplast group II intron splicing in Setaria viridis

Chromosomal evolution, environmental heterogeneity, and migration drive spatial patterns of species richness in Calochortus (Liliaceae)

Differential regulation of caffeine metabolism in Coffea arabica (Arabica) and Coffea canephora (Robusta)

A Solanum lycopersicoides reference genome facilitates insights into tomato specialized metabolism and immunity

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