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Transcriptional downregulation of MHC class I and melanoma de- differentiation in resistance to PD-1 inhibition

Nature communications, 2020-04, Vol.11 (1), p.1897-1897, Article 1897

2020

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Regional Activation of the Cancer Genome by Long-Range Epigenetic Remodeling

Cancer cell, 2013-01, Vol.23 (1), p.9-22

2013

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Construction and optimization of multi-platform precision pathways for precision medicine

Scientific reports, 2024-02, Vol.14 (1), p.4248-4248

2024

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Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias

Epigenetics, 2011-01, Vol.6 (1), p.34-44

2011

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Discovery pipeline for epigenetically deregulated miRNAs in cancer: integration of primary miRNA transcription

BMC genomics, 2011-01, Vol.12 (1), p.54-54, Article 54

2011

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Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation

Genome research, 2010-12, Vol.20 (12), p.1719

2010

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Targeting activating mutations of EZH2 leads to potent cell growth inhibition in human melanoma by derepression of tumor suppressor genes

Oncotarget, 2015-09, Vol.6 (29), p.27023-27036

2015

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Evaluating stably expressed genes in single cells

Gigascience, 2019-09, Vol.8 (9)

2019

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Whole genome analysis reveals the genomic complexity in metastatic cutaneous squamous cell carcinoma

Frontiers in oncology, 2022-08, Vol.12, p.919118-919118

2022

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Oral Squamous Cell Carcinoma in Young Patients Show Higher Rates of EGFR Amplification: Implications for Novel Personalized Therapy

Frontiers in oncology, 2021-11, Vol.11, p.750852-750852

2021

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Viral Integration Plays a Minor Role in the Development and Prognostication of Oral Squamous Cell Carcinoma

Cancers, 2022-10, Vol.14 (21), p.5213

2022

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Genome-wide analysis in Drosophila reveals diet-by-gene interactions and uncovers diet-responsive genes

G3 : genes - genomes - genetics, 2021-10, Vol.11 (10)

2021

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Analysis of the Whole-Exome Sequencing of Tumor and Circulating Tumor DNA in Metastatic Melanoma

Cancers, 2019-11, Vol.11 (12), p.1905

2019

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Cross-Platform Omics Prediction procedure: a statistical machine learning framework for wider implementation of precision medicine

NPJ digital medicine, 2022-07, Vol.5 (1), p.85-85, Article 85

2022

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NOVEL PREPROCESSING APPROACHES FOR OMICS DATA TYPES AND THEIR PERFORMANCE EVALUATION

Bulletin of the Australian Mathematical Society, 2017-10, Vol.96 (2), p.348-349

STRBENAC, DARIO

2017

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PD-L1 Negative Status is Associated with Lower Mutation Burden, Differential Expression of Immune-Related Genes, and Worse Survival in Stage III Melanoma

Clinical cancer research, 2016-08, Vol.22 (15), p.3915-3923

2016

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Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer

Genome research, 2012-02, Vol.22 (2), p.307

2012

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Comparing Genomic Landscapes of Oral and Cutaneous Squamous Cell Carcinoma of the Head and Neck: Quest for Novel Diagnostic Markers

Modern pathology, 2023-08, Vol.36 (8), p.100190-100190, Article 100190

2023

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Whole genome duplication in oral squamous cell carcinoma in patients younger than 50years: implications for prognosis and adverse clinicopathological factors

Genes chromosomes & cancer, 2022-09, Vol.61 (9), p.561-571

2022

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DCARS: differential correlation across ranked samples

Bioinformatics, 2019-03, Vol.35 (5), p.823-829

2019

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Differential distribution improves gene selection stability and has competitive classification performance for patient survival

Nucleic acids research, 2016-07, Vol.44 (13), p.e119

2016

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Transcriptomic analysis of sea star development through metamorphosis to the highly derived pentameral body plan with a focus on neural transcription factors

DNA research, 2020-02, Vol.27 (1)

2020

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Whole genome duplication in oral squamous cell carcinoma in patients younger than 50 years: implications for prognosis and adverse clinicopathological factors

Genes chromosomes & cancer, 2022-09, Vol.61 (9), p.561-571

2022

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Combining BET and HDAC inhibitors synergistically induces apoptosis of melanoma and suppresses AKT and YAP signaling

Oncotarget, 2015-08, Vol.6 (25), p.21507-21521

2015

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Transcriptomic analysis of Nodal – and BMP- associated genes during development to the juvenile seastar in Parvulastra exigua (Asterinidae)

Marine genomics, 2021-10, Vol.59, p.100857-100857, Article 100857

2021

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Transcriptional downregulation of MHC class I and melanoma de- differentiation in resistance to PD-1 inhibition

Regional Activation of the Cancer Genome by Long-Range Epigenetic Remodeling

Construction and optimization of multi-platform precision pathways for precision medicine

Comparison of methyl-DNA immunoprecipitation (MeDIP) and methyl-CpG binding domain (MBD) protein capture for genome-wide DNA methylation analysis reveal CpG sequence coverage bias

Discovery pipeline for epigenetically deregulated miRNAs in cancer: integration of primary miRNA transcription

Evaluation of affinity-based genome-wide DNA methylation data: effects of CpG density, amplification bias, and copy number variation

Targeting activating mutations of EZH2 leads to potent cell growth inhibition in human melanoma by derepression of tumor suppressor genes

Evaluating stably expressed genes in single cells

Whole genome analysis reveals the genomic complexity in metastatic cutaneous squamous cell carcinoma

Oral Squamous Cell Carcinoma in Young Patients Show Higher Rates of EGFR Amplification: Implications for Novel Personalized Therapy

Viral Integration Plays a Minor Role in the Development and Prognostication of Oral Squamous Cell Carcinoma

Genome-wide analysis in Drosophila reveals diet-by-gene interactions and uncovers diet-responsive genes

Analysis of the Whole-Exome Sequencing of Tumor and Circulating Tumor DNA in Metastatic Melanoma

Cross-Platform Omics Prediction procedure: a statistical machine learning framework for wider implementation of precision medicine

NOVEL PREPROCESSING APPROACHES FOR OMICS DATA TYPES AND THEIR PERFORMANCE EVALUATION

PD-L1 Negative Status is Associated with Lower Mutation Burden, Differential Expression of Immune-Related Genes, and Worse Survival in Stage III Melanoma

Acetylation of H2A.Z is a key epigenetic modification associated with gene deregulation and epigenetic remodeling in cancer

Comparing Genomic Landscapes of Oral and Cutaneous Squamous Cell Carcinoma of the Head and Neck: Quest for Novel Diagnostic Markers

Whole genome duplication in oral squamous cell carcinoma in patients younger than 50years: implications for prognosis and adverse clinicopathological factors

DCARS: differential correlation across ranked samples

Differential distribution improves gene selection stability and has competitive classification performance for patient survival

Transcriptomic analysis of sea star development through metamorphosis to the highly derived pentameral body plan with a focus on neural transcription factors

Whole genome duplication in oral squamous cell carcinoma in patients younger than 50 years: implications for prognosis and adverse clinicopathological factors

Combining BET and HDAC inhibitors synergistically induces apoptosis of melanoma and suppresses AKT and YAP signaling

Transcriptomic analysis of Nodal – and BMP- associated genes during development to the juvenile seastar in Parvulastra exigua (Asterinidae)

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