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Digital Single-Cell Analysis of Plant Organ Development Using 3DCellAtlas

The Plant cell, 2015-04, Vol.27 (4), p.1018-1033

2015

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On the micro-indentation of plant cells in a tissue context

Physical biology, 2017-02, Vol.14 (1), p.015003-015003

2017

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Global Topological Order Emerges through Local Mechanical Control of Cell Divisions in the Arabidopsis Shoot Apical Meristem

Cell systems, 2019-01, Vol.8 (1), p.53-65.e3

2019

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3DCellAtlas Meristem: a tool for the global cellular annotation of shoot apical meristems

Plant methods, 2019-04, Vol.15 (1), p.33-33, Article 33

2019

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The cellular basis for synergy between RCO and KNOX1 homeobox genes in leaf shape diversity

Current biology, 2022-09, Vol.32 (17), p.3773-3784.e5

2022

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A Growth-Based Framework for Leaf Shape Development and Diversity

Cell, 2019-05, Vol.177 (6), p.1405-1418.e17

2019

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A WOX/Auxin Biosynthesis Module Controls Growth to Shape Leaf Form

Current biology, 2020-12, Vol.30 (24), p.4857-4868.e6

2020

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Interspersed expression of CUP-SHAPED COTYLEDON2 and REDUCED COMPLEXITY shapes Cardamine hirsuta complex leaf form

Current biology, 2023-07, Vol.33 (14), p.2977-2987.e6

2023

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From Stained Plant Tissues to Quantitative Cell Segmentation Analysis with MorphoGraphX

Methods in molecular biology (Clifton, N.J.), 2020, Vol.2122, p.63

2020

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Auxin-dependent control of cytoskeleton and cell shape regulates division orientation in the Arabidopsis embryo

Current biology, 2021-11, Vol.31 (22), p.4946-4955.e4

2021

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Quantifying Plant Growth and Cell Proliferation with MorphoGraphX

Methods in molecular biology (Clifton, N.J.), 2019-01, Vol.1992, p.269

2019

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The annotation and analysis of complex 3D plant organs using 3DCoordX

Plant physiology (Bethesda), 2022-06, Vol.189 (3), p.1278-1295

2022

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A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context

Development (Cambridge), 2024-07, Vol.151 (14)

2024

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A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule

eLife, 2021-01, Vol.10

2021

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Choice reaching with a LEGO arm robot (CoRLEGO): The motor system guides visual attention to movement-relevant information

Neural networks, 2015-12, Vol.72, p.3-12

2015

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Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling

Nature plants, 2020-06, Vol.6 (6), p.686-698

2020

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In Silico Methods for Cell Annotation, Quantification of Gene Expression, and Cell Geometry at Single-Cell Resolution Using 3DCellAtlas

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1497, p.99

2017

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A robotics-based approach to modeling of choice reaching experiments on visual attention

Frontiers in psychology, 2012-01, Vol.3, p.105-105

2012

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Motor cortex guides selection of predictable movement targets

Behavioural brain research, 2015-07, Vol.287, p.238-246

2015

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A cognitive robotics approach to the human reaching process: simulating goal-directed reaching and choice-reaching tasks with a closed-loop model

Strauss, Soeren

2014

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Echo State Networks for Online Prediction of Movement Data – Comparing Investigations

Artificial Neural Networks - ICANN 2008, p.710-719

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Modeling Plant Tissue Growth and Cell Division

Mathematical Modelling in Plant Biology, 2018, p.107-138

2018

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Designing Cathodes and Cathode Active Materials for Solid‐State Batteries

Advanced energy materials, 2022-09, Vol.12 (35), p.n/a

2022

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Digital Single-Cell Analysis of Plant Organ Development Using 3DCellAtlas

On the micro-indentation of plant cells in a tissue context

Global Topological Order Emerges through Local Mechanical Control of Cell Divisions in the Arabidopsis Shoot Apical Meristem

3DCellAtlas Meristem: a tool for the global cellular annotation of shoot apical meristems

The cellular basis for synergy between RCO and KNOX1 homeobox genes in leaf shape diversity

A Growth-Based Framework for Leaf Shape Development and Diversity

A WOX/Auxin Biosynthesis Module Controls Growth to Shape Leaf Form

Interspersed expression of CUP-SHAPED COTYLEDON2 and REDUCED COMPLEXITY shapes Cardamine hirsuta complex leaf form

From Stained Plant Tissues to Quantitative Cell Segmentation Analysis with MorphoGraphX

Auxin-dependent control of cytoskeleton and cell shape regulates division orientation in the Arabidopsis embryo

Accurate and versatile 3D segmentation of plant tissues at cellular resolution

Quantifying Plant Growth and Cell Proliferation with MorphoGraphX

The annotation and analysis of complex 3D plant organs using 3DCoordX

A deep learning-based toolkit for 3D nuclei segmentation and quantitative analysis in cellular and tissue context

A digital 3D reference atlas reveals cellular growth patterns shaping the Arabidopsis ovule

Using positional information to provide context for biological image analysis with MorphoGraphX 2.0

Choice reaching with a LEGO arm robot (CoRLEGO): The motor system guides visual attention to movement-relevant information

Robust organ size requires robust timing of initiation orchestrated by focused auxin and cytokinin signalling

In Silico Methods for Cell Annotation, Quantification of Gene Expression, and Cell Geometry at Single-Cell Resolution Using 3DCellAtlas

A robotics-based approach to modeling of choice reaching experiments on visual attention

Motor cortex guides selection of predictable movement targets

A cognitive robotics approach to the human reaching process: simulating goal-directed reaching and choice-reaching tasks with a closed-loop model

Echo State Networks for Online Prediction of Movement Data – Comparing Investigations

Modeling Plant Tissue Growth and Cell Division

Designing Cathodes and Cathode Active Materials for Solid‐State Batteries

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