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Reciprocal regulation as a source of ultrasensitivity in two-component systems with a bifunctional sensor kinase

PLoS computational biology, 2014-05, Vol.10 (5), p.e1003614-e1003614

2014

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Analysis of substrate competition in regulatory network motifs: Stimulus–response curves, thresholds and ultrasensitivity

Journal of theoretical biology, 2015-09, Vol.380, p.74-82

Straube, Ronny

2015

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Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoire

PLoS computational biology, 2017-11, Vol.13 (11), p.e1005869-e1005869

2017

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Operating regimes of covalent modification cycles at high enzyme concentrations

Journal of theoretical biology, 2017-10, Vol.431, p.39-48

Straube, Ronny

2017

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Analysis of network motifs in cellular regulation: Structural similarities, input–output relations and signal integration

BioSystems, 2017-12, Vol.162, p.215-232

Straube, Ronny

2017

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Sensitivity and Robustness in Covalent Modification Cycles with a Bifunctional Converter Enzyme

Biophysical journal, 2013-10, Vol.105 (8), p.1925-1933

Straube, Ronny

2013

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Reciprocal Regulation as a Source of Ultrasensitivity in Two-Component Systems with a Bifunctional Sensor Kinase: e1003614

PLoS computational biology, 2014-05, Vol.10 (5)

Straube, Ronny

2014

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A mean-field description for the expansion kinetics of activated T cell populations

Proceedings of the National Academy of Sciences - PNAS, 2023-11, Vol.120 (45), p.e2305774120-e2305774120

2023

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Comment on "load-induced modulation of signal transduction networks": reconciling ultrasensitivity with bifunctionality?

Science signaling, 2012-01, Vol.5 (205), p.lc1; author reply lc2

Straube, Ronny

2012

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Reciprocal enzyme regulation as a source of bistability in covalent modification cycles

Journal of theoretical biology, 2013-08, Vol.330, p.56-74

2013

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Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression

Molecular cell, 2018-03, Vol.69 (5), p.773-786.e6

2018

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Erratum to “Reciprocal enzyme regulation as a source of bistability in covalent modification cycles” [J. Theor. Biol. 330 (2013) 56–74]

Journal of theoretical biology, 2013-09, Vol.333, p.210-210

2013

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Bistability and Nonmonotonic Induction of the lac Operon in the Natural Lactose Uptake System

Biophysical journal, 2017-05, Vol.112 (9), p.1984-1996

2017

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DIFFUSION ON A SPHERE WITH LOCALIZED TRAPS: MEAN FIRST PASSAGE TIME, EIGENVALUE ASYMPTOTICS, AND FEKETE POINTS

SIAM journal on applied mathematics, 2009-01, Vol.70 (1), p.302-332

2009

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Virtual Populations for Quantitative Systems Pharmacology Models

Methods in molecular biology (Clifton, N.J.), 2022, Vol.2486, p.129

2022

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PIKES Analysis Reveals Response to Degraders and Key Regulatory Mechanisms of the CRL4 Network

Molecular cell, 2020-03, Vol.77 (5), p.1092-1106.e9

2020

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An Asymptotic Analysis of the Mean First Passage Time for Narrow Escape Problems: Part II: The Sphere

Multiscale modeling & simulation, 2010-01, Vol.8 (3), p.836-870

2010

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Investigating the effects of molecular crowding on Ca2+ diffusion using a particle-based simulation model

Chaos (Woodbury, N.Y.), 2009-09, Vol.19 (3), p.037110-037110

2009

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Investigating the effects of molecular crowding on Ca 2 + diffusion using a particle-based simulation model

Chaos (Woodbury, N.Y.), 2009-09, Vol.19 (3), p.037110-037110-8

2009

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Modeling the electron transport chain of purple non-sulfur bacteria

Molecular systems biology, 2008, Vol.4 (1), p.156-n/a

2008

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Reaction Rate of Small Diffusing Molecules on a Cylindrical Membrane

Journal of statistical physics, 2007-10, Vol.129 (2), p.377-405

2007

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Inward Rotating Spiral Waves in Glycolysis

Biophysical journal, 2010-07, Vol.99 (1), p.L4-L6

2010

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An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobacter sphaeroides

The FEBS journal, 2012-09, Vol.279 (18), p.3449-3461

2012

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An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobactersphaeroides

The FEBS journal, 2012-09, Vol.279 (18), p.3449-3461

2012

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Modeling the Light- and Redox-Dependent Interaction of PpsR/AppA in Rhodobacter sphaeroides

Biophysical journal, 2011-05, Vol.100 (10), p.2347-2355

2011

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Reciprocal regulation as a source of ultrasensitivity in two-component systems with a bifunctional sensor kinase

Analysis of substrate competition in regulatory network motifs: Stimulus–response curves, thresholds and ultrasensitivity

Trade-off and flexibility in the dynamic regulation of the cullin-RING ubiquitin ligase repertoire

Operating regimes of covalent modification cycles at high enzyme concentrations

Analysis of network motifs in cellular regulation: Structural similarities, input–output relations and signal integration

Sensitivity and Robustness in Covalent Modification Cycles with a Bifunctional Converter Enzyme

Reciprocal Regulation as a Source of Ultrasensitivity in Two-Component Systems with a Bifunctional Sensor Kinase: e1003614

A mean-field description for the expansion kinetics of activated T cell populations

Comment on "load-induced modulation of signal transduction networks": reconciling ultrasensitivity with bifunctionality?

Reciprocal enzyme regulation as a source of bistability in covalent modification cycles

Cand1-Mediated Adaptive Exchange Mechanism Enables Variation in F-Box Protein Expression

Erratum to “Reciprocal enzyme regulation as a source of bistability in covalent modification cycles” [J. Theor. Biol. 330 (2013) 56–74]

Bistability and Nonmonotonic Induction of the lac Operon in the Natural Lactose Uptake System

DIFFUSION ON A SPHERE WITH LOCALIZED TRAPS: MEAN FIRST PASSAGE TIME, EIGENVALUE ASYMPTOTICS, AND FEKETE POINTS

Virtual Populations for Quantitative Systems Pharmacology Models

PIKES Analysis Reveals Response to Degraders and Key Regulatory Mechanisms of the CRL4 Network

An Asymptotic Analysis of the Mean First Passage Time for Narrow Escape Problems: Part II: The Sphere

Investigating the effects of molecular crowding on Ca2+ diffusion using a particle-based simulation model

Investigating the effects of molecular crowding on Ca 2 + diffusion using a particle-based simulation model

Modeling the electron transport chain of purple non-sulfur bacteria

Reaction Rate of Small Diffusing Molecules on a Cylindrical Membrane

Inward Rotating Spiral Waves in Glycolysis

An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobacter sphaeroides

An extended model for the repression of photosynthesis genes by the AppA/PpsR system in Rhodobactersphaeroides

Modeling the Light- and Redox-Dependent Interaction of PpsR/AppA in Rhodobacter sphaeroides

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