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EMAAS: an extensible grid-based rich internet application for microarray data analysis and management

BMC bioinformatics, 2008-11, Vol.9 (1), p.493-493, Article 493

2008

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Enhanced genome annotation using structural profiles in the program 3D-PSSM

Journal of molecular biology, 2000-06, Vol.299 (2), p.499-520

2000

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Prediction of protein–protein interactions by docking methods

Current Opinion in Structural Biology, 2002-02, Vol.12 (1), p.28-35

2002

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CAPRI: A Critical Assessment of PRedicted Interactions

Proteins, structure, function, and bioinformatics, 2003-07, Vol.52 (1), p.2-9

2003

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Automated Prediction of Protein Function and Detection of Functional Sites from Structure

Proceedings of the National Academy of Sciences - PNAS, 2004-10, Vol.101 (41), p.14754-14759

2004

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The flagellum in malarial parasites

Current opinion in microbiology, 2010-08, Vol.13 (4), p.491-500

2010

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The Relationship between the Flexibility of Proteins and their Conformational States on Forming Protein–Protein Complexes with an Application to Protein–Protein Docking

Journal of molecular biology, 2005-04, Vol.347 (5), p.1077-1101

2005

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Isolation of a small molecule inhibitor of DNA base excision repair

Nucleic acids research, 2005-01, Vol.33 (15), p.4711-4724

2005

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Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM

Proteins, structure, function, and bioinformatics, 2001, Vol.45 (S5), p.39-46

2001

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Assessing Protein Co-evolution in the Context of the Tree of Life Assists in the Prediction of the Interactome

Journal of molecular biology, 2005-09, Vol.352 (4), p.1002-1015

2005

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Modelling protein docking using shape complementarity, electrostatics and biochemical information

Journal of molecular biology, 1997-09, Vol.272 (1), p.106-120

1997

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Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking

Journal of molecular biology, 2001-08, Vol.311 (2), p.395-408

2001

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Proteomic analysis of Plasmodium in the mosquito: progress and pitfalls

Parasitology, 2012-08, Vol.139 (9), p.1131-1145

2012

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Identification and application of the concepts important for accurate and reliable protein secondary structure prediction

Protein science, 1996-11, Vol.5 (11), p.2298-2310

1996

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Rapid refinement of protein interfaces incorporating solvation: application to the docking problem

Journal of molecular biology, 1998-02, Vol.276 (1), p.265-285

1998

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An analysis of conformational changes on protein–protein association: implications for predictive docking

Protein engineering, 1999-04, Vol.12 (4), p.271-283

1999

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Supersites within superfolds. Binding site similarity in the absence of homology

Journal of molecular biology, 1998-10, Vol.282 (4), p.903-918

1998

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The Identification of Similarities between Biological Networks: Application to the Metabolome and Interactome

Journal of molecular biology, 2007-06, Vol.369 (4), p.1126-1139

2007

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Model building by comparison at CASP3: Using expert knowledge and computer automation

Proteins, structure, function, and bioinformatics, 1999, Vol.37 (S3), p.47-54

1999

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Support Vector Inductive Logic Programming

Discovery Science, 2005, p.163-175

2005

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Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI

Proteins, structure, function, and bioinformatics, 2005-08, Vol.60 (2), p.281-288

2005

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Structural characterization of the human proteome

Genome research, 2002-11, Vol.12 (11), p.1625-1641

2002

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Side‐chain conformational entropy in protein folding

Protein science, 1995-11, Vol.4 (11), p.2247-2251

1995

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ArchDB: automated protein loop classification as a tool for structural genomics

Nucleic acids research, 2004-01, Vol.32 (Database issue), p.D185-188

2004

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Evolution of Enzymes in Metabolism: A Network Perspective

Journal of molecular biology, 2002-07, Vol.320 (4), p.751-770

2002

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EMAAS: an extensible grid-based rich internet application for microarray data analysis and management

Enhanced genome annotation using structural profiles in the program 3D-PSSM

Prediction of protein–protein interactions by docking methods

CAPRI: A Critical Assessment of PRedicted Interactions

Automated Prediction of Protein Function and Detection of Functional Sites from Structure

The flagellum in malarial parasites

The Relationship between the Flexibility of Proteins and their Conformational States on Forming Protein–Protein Complexes with an Application to Protein–Protein Docking

Isolation of a small molecule inhibitor of DNA base excision repair

Enhancement of protein modeling by human intervention in applying the automatic programs 3D-JIGSAW and 3D-PSSM

Assessing Protein Co-evolution in the Context of the Tree of Life Assists in the Prediction of the Interactome

Modelling protein docking using shape complementarity, electrostatics and biochemical information

Automated structure-based prediction of functional sites in proteins: applications to assessing the validity of inheriting protein function from homology in genome annotation and to protein docking

Proteomic analysis of Plasmodium in the mosquito: progress and pitfalls

Identification and application of the concepts important for accurate and reliable protein secondary structure prediction

Rapid refinement of protein interfaces incorporating solvation: application to the docking problem

An analysis of conformational changes on protein–protein association: implications for predictive docking

Supersites within superfolds. Binding site similarity in the absence of homology

The Identification of Similarities between Biological Networks: Application to the Metabolome and Interactome

Model building by comparison at CASP3: Using expert knowledge and computer automation

Support Vector Inductive Logic Programming

Protein-protein docking using 3D-Dock in rounds 3, 4, and 5 of CAPRI

Structural characterization of the human proteome

Side‐chain conformational entropy in protein folding

ArchDB: automated protein loop classification as a tool for structural genomics

Evolution of Enzymes in Metabolism: A Network Perspective

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