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Phenomes: the current frontier in animal breeding

Genetics selection evolution (Paris), 2021-03, Vol.53 (1), p.22-22, Article 22

2021

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Estimation of linkage disequilibrium in four US pig breeds

BMC genomics, 2012-01, Vol.13 (1), p.24-24, Article 24

2012

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Assessing Dissimilarity Measures for Sample-Based Hierarchical Clustering of RNA Sequencing Data Using Plasmode Datasets

PloS one, 2015-07, Vol.10 (7), p.e0132310-e0132310

2015

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Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs

BMC genomics, 2019-01, Vol.20 (1), p.3-3, Article 3

2019

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Evidence for transcriptome-wide RNA editing among Sus scrofa PRE-1 SINE elements

BMC genomics, 2017-05, Vol.18 (1), p.360-360, Article 360

2017

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The Social Life of Pigs: Changes in Affiliative and Agonistic Behaviors following Mixing

Animals (Basel), 2022-01, Vol.12 (2), p.206

2022

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Integrated Genome-Wide Analysis of MicroRNA Expression Quantitative Trait Loci in Pig Longissimus Dorsi Muscle

Frontiers in genetics, 2021-03, Vol.12, p.644091-644091

2021

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Sex-Specific Modulation of Fetal Adipogenesis by Gestational Bisphenol A and Bisphenol S Exposure

Endocrinology (Philadelphia), 2017-11, Vol.158 (11), p.3844-3858

2017

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Genome-Wide Association Analyses Based on Broadly Different Specifications for Prior Distributions, Genomic Windows, and Estimation Methods

Genetics (Austin), 2017-08, Vol.206 (4), p.1791-1806

2017

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Whole-Genome Multi-omic Study of Survival in Patients with Glioblastoma Multiforme

G3 : genes - genomes - genetics, 2018-11, Vol.8 (11), p.3627-3636

2018

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Heuristic hyperparameter optimization of deep learning models for genomic prediction

G3 : genes - genomes - genetics, 2021-07, Vol.11 (7)

2021

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Molecular advances in QTL discovery and application in pig breeding

Trends in genetics, 2013-04, Vol.29 (4), p.215-224

2013

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Cover crop effect on corn growth and yield as influenced by topography

Agriculture, ecosystems & environment, 2014-05, Vol.189, p.229-239

2014

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Impacts on Atlantic Killifish from Neurotoxicants: Genes, Behavior, and Population-Relevant Outcomes

Environmental science & technology, 2024-10, Vol.58 (39), p.17235-17246

2024

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Genomic Prediction Accounting for Residual Heteroskedasticity

G3 : genes - genomes - genetics, 2016-01, Vol.6 (1), p.1-13

2016

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Altered Larval Yellow Perch Swimming Behavior Due to Methylmercury and PCB126 Detected Using Hidden Markov Chain Models

Environmental science & technology, 2022-03, Vol.56 (6), p.3514-3523

2022

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Profiling and characterization of a longissimus dorsi muscle microRNA dataset from an F2 Duroc×Pietrain pig resource population

Genomics data, 2017-09, Vol.13 (C), p.50-53

2017

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Deciphering Sex-Specific Genetic Architectures Using Local Bayesian Regressions

Genetics (Austin), 2020-05, Vol.215 (1), p.231-241

2020

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Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations

BMC bioinformatics, 2014-07, Vol.15 (1), p.246-246, Article 246

2014

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Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH

American journal of physiology: Gastrointestinal and liver physiology, 2020-03, Vol.318 (3), p.G582-G609

2020

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Increases in the mean and variability of thermal regimes result in differential phenotypic responses among genotypes during early ontogenetic stages of lake sturgeon (Acipenser fulvescens)

Evolutionary applications, 2016-12, Vol.9 (10), p.1258-1270

2016

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A hidden Markov approach for ascertaining cSNP genotypes from RNA sequence data in the presence of allelic imbalance by exploiting linkage disequilibrium

BMC bioinformatics, 2015-02, Vol.16 (1), p.61-61, Article 61

2015

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Time budgets of group-housed pigs in relation to social aggression and production

Journal of animal science, 2021-05, Vol.99 (5)

2021

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Heritability estimates and predictive ability for pig meat quality traits using identity‐by‐state and identity‐by‐descent relationships in an F2 population

Journal of animal breeding and genetics (1986), 2023-01, Vol.140 (1), p.13-27

2023

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Heritability estimates and predictive ability for pig meat quality traits using identity-by-state and identity-by-descent relationships in an F 2 population

Journal of animal breeding and genetics (1986), 2023-01, Vol.140 (1), p.13-27

2023

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Phenomes: the current frontier in animal breeding

Estimation of linkage disequilibrium in four US pig breeds

Assessing Dissimilarity Measures for Sample-Based Hierarchical Clustering of RNA Sequencing Data Using Plasmode Datasets

Genetic control of longissimus dorsi muscle gene expression variation and joint analysis with phenotypic quantitative trait loci in pigs

Evidence for transcriptome-wide RNA editing among Sus scrofa PRE-1 SINE elements

The Social Life of Pigs: Changes in Affiliative and Agonistic Behaviors following Mixing

Integrated Genome-Wide Analysis of MicroRNA Expression Quantitative Trait Loci in Pig Longissimus Dorsi Muscle

Sex-Specific Modulation of Fetal Adipogenesis by Gestational Bisphenol A and Bisphenol S Exposure

Genome-Wide Association Analyses Based on Broadly Different Specifications for Prior Distributions, Genomic Windows, and Estimation Methods

Whole-Genome Multi-omic Study of Survival in Patients with Glioblastoma Multiforme

Heuristic hyperparameter optimization of deep learning models for genomic prediction

Molecular advances in QTL discovery and application in pig breeding

Cover crop effect on corn growth and yield as influenced by topography

Impacts on Atlantic Killifish from Neurotoxicants: Genes, Behavior, and Population-Relevant Outcomes

Genomic Prediction Accounting for Residual Heteroskedasticity

Altered Larval Yellow Perch Swimming Behavior Due to Methylmercury and PCB126 Detected Using Hidden Markov Chain Models

Profiling and characterization of a longissimus dorsi muscle microRNA dataset from an F2 Duroc×Pietrain pig resource population

Deciphering Sex-Specific Genetic Architectures Using Local Bayesian Regressions

Rapid screening for phenotype-genotype associations by linear transformations of genomic evaluations

Dysregulated FXR-FGF19 signaling and choline metabolism are associated with gut dysbiosis and hyperplasia in a novel pig model of pediatric NASH

Increases in the mean and variability of thermal regimes result in differential phenotypic responses among genotypes during early ontogenetic stages of lake sturgeon (Acipenser fulvescens)

A hidden Markov approach for ascertaining cSNP genotypes from RNA sequence data in the presence of allelic imbalance by exploiting linkage disequilibrium

Time budgets of group-housed pigs in relation to social aggression and production

Heritability estimates and predictive ability for pig meat quality traits using identity‐by‐state and identity‐by‐descent relationships in an F2 population

Heritability estimates and predictive ability for pig meat quality traits using identity-by-state and identity-by-descent relationships in an F 2 population

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