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Quantification of pathogens and markers of fecal contamination during storm events along popular surfing beaches in San Diego, California

Water research (Oxford), 2018-06, Vol.136, p.137-149

2018

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Defining seasonal marine microbial community dynamics

Nature reviews. Microbiology, 2012-02, Vol.6 (2), p.298-308

2012

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Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

The ISME Journal, 2015-03, Vol.9 (3), p.563-580

2015

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RNA Viromics of Southern California Wastewater and Detection of SARS-CoV-2 Single-Nucleotide Variants

Applied and environmental microbiology, 2021-11, Vol.87 (23), p.1

2021

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latitudinal diversity gradient in planktonic marine bacteria

Proceedings of the National Academy of Sciences - PNAS, 2008-06, Vol.105 (22), p.7774-7778

2008

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Marine bacterial, archaeal and protistan association networks reveal ecological linkages

The ISME Journal, 2011-09, Vol.5 (9), p.1414-1425

2011

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Carbonate-hosted methanotrophy represents an unrecognized methane sink in the deep sea

Nature communications, 2014-10, Vol.5 (1), p.5094-5094, Article 5094

2014

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Annually Reoccurring Bacterial Communities Are Predictable from Ocean Conditions

Proceedings of the National Academy of Sciences - PNAS, 2006-08, Vol.103 (35), p.13104-13109

2006

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Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

The ISME Journal, 2013-12, Vol.7 (12), p.2259-2273

2013

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Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors

Bioinformatics, 2006-10, Vol.22 (20), p.2532-2538

2006

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A Combined Digital PCR and Next Generation DNA-Sequencing Based Approach for Tracking Nearshore Pollutant Dynamics Along the Southwest United States/Mexico Border

Frontiers in microbiology, 2021-08, Vol.12, p.674214-674214

2021

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Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California

The ISME Journal, 2011-07, Vol.5 (7), p.1077-1085

2011

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Correlation between wastewater and COVID-19 case incidence rates in major California sewersheds across three variant periods

Journal of water and health, 2023-09, Vol.21 (9), p.1303-1317

2023

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Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes

mSystems, 2021-08, Vol.6 (4), p.e0057121

2021

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Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone

Environmental microbiology reports, 2013-06, Vol.5 (3), p.414-423

2013

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Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance

The Science of the total environment, 2022-01, Vol.805, p.149877-149877, Article 149877

2022

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Microbial abundance and diversity patterns associated with sediments and carbonates from the methane seep environments of Hydrate Ridge, OR

Frontiers in Marine Science, 2014-10, Vol.1, p.1-16

2014

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Incidence of gastrointestinal illness following wet weather recreational exposures: Harmonization of quantitative microbial risk assessment with an epidemiologic investigation of surfers

Water research (Oxford), 2017-09, Vol.121, p.280-289

2017

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Acute Illness Among Surfers After Exposure to Seawater in Dry- and Wet-Weather Conditions

American journal of epidemiology, 2017-10, Vol.186 (7), p.866-875

2017

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Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I

Nature protocols, 2007-02, Vol.2 (2), p.269-276

2007

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Community structure of marine bacterioplankton : patterns, networks, and relationships to function

Aquatic microbial ecology, 2008-01, Vol.53 (1), p.69-81

2008

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Monodeuterated Methane, an Isotopic Tool To Assess Biological Methane Metabolism Rates

mSphere, 2017-07, Vol.2 (4)

2017

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The challenges of microbial source tracking at urban beaches for Quantitative Microbial Risk Assessment (QMRA)

Marine pollution bulletin, 2020-11, Vol.160, p.111546-111546, Article 111546

2020

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Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020–21 reveals widespread transcription of antibiotic resistance genes

Water research (Oxford), 2023-02, Vol.229, p.119421-119421, Article 119421

2023

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Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates

BMC systems biology, 2011-12, Vol.5 Suppl 2 (Suppl 2), p.S15-S15, Article S15

2011

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Quantification of pathogens and markers of fecal contamination during storm events along popular surfing beaches in San Diego, California

Defining seasonal marine microbial community dynamics

Seasonal and interannual variability of the marine bacterioplankton community throughout the water column over ten years

RNA Viromics of Southern California Wastewater and Detection of SARS-CoV-2 Single-Nucleotide Variants

latitudinal diversity gradient in planktonic marine bacteria

Marine bacterial, archaeal and protistan association networks reveal ecological linkages

Carbonate-hosted methanotrophy represents an unrecognized methane sink in the deep sea

Annually Reoccurring Bacterial Communities Are Predictable from Ocean Conditions

Temporal variability and coherence of euphotic zone bacterial communities over a decade in the Southern California Bight

Local similarity analysis reveals unique associations among marine bacterioplankton species and environmental factors

A Combined Digital PCR and Next Generation DNA-Sequencing Based Approach for Tracking Nearshore Pollutant Dynamics Along the Southwest United States/Mexico Border

Co-occurrence patterns for abundant marine archaeal and bacterial lineages in the deep chlorophyll maximum of coastal California

Correlation between wastewater and COVID-19 case incidence rates in major California sewersheds across three variant periods

Pathogenic Vibrio Species Are Associated with Distinct Environmental Niches and Planktonic Taxa in Southern California (USA) Aquatic Microbiomes

Abundance and distribution of diverse membrane-bound monooxygenase (Cu-MMO) genes within the Costa Rica oxygen minimum zone

Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance

Microbial abundance and diversity patterns associated with sediments and carbonates from the methane seep environments of Hydrate Ridge, OR

Incidence of gastrointestinal illness following wet weather recreational exposures: Harmonization of quantitative microbial risk assessment with an epidemiologic investigation of surfers

Acute Illness Among Surfers After Exposure to Seawater in Dry- and Wet-Weather Conditions

Virus and prokaryote enumeration from planktonic aquatic environments by epifluorescence microscopy with SYBR Green I

Community structure of marine bacterioplankton : patterns, networks, and relationships to function

Monodeuterated Methane, an Isotopic Tool To Assess Biological Methane Metabolism Rates

The challenges of microbial source tracking at urban beaches for Quantitative Microbial Risk Assessment (QMRA)

Longitudinal metatranscriptomic sequencing of Southern California wastewater representing 16 million people from August 2020–21 reveals widespread transcription of antibiotic resistance genes

Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates

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