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Filtered Z-Closure Supernetworks for Extracting and Visualizing Recurrent Signal from Incongruent Gene Trees

Systematic biology, 2008-12, Vol.57 (6), p.939-947

2008

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Missing Data, Incomplete Taxa, and Phylogenetic Accuracy

Systematic biology, 2003-08, Vol.52 (4), p.528-538

2003

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Performance-Based Selection of Likelihood Models for Phylogeny Estimation

Systematic biology, 2003-10, Vol.52 (5), p.674-683

2003

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Which Random Processes Describe the Tree of Life? A Large-Scale Study of Phylogenetic Tree Imbalance

Systematic biology, 2006-08, Vol.55 (4), p.685-691

2006

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Evaluating Intraspecific “Network” Construction Methods Using Simulated Sequence Data: Do Existing Algorithms Outperform the Global Maximum Parsimony Approach?

Systematic biology, 2005-06, Vol.54 (3), p.363-372

2005

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Accepting Partnership by Submission? Morphological Phylogenetics in a Molecular Millennium

Systematic biology, 2004-04, Vol.53 (2), p.333-359

2004

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A Model of Horizontal Gene Transfer and the Bacterial Phylogeny Problem

Systematic biology, 2007-08, Vol.56 (4), p.633-642

2007

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Majority-Rule Supertrees

Systematic biology, 2007-06, Vol.56 (3), p.445-452

2007

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Phylogenetic super-networks from partial trees

IEEE/ACM transactions on computational biology and bioinformatics, 2004-10, Vol.1 (4), p.151-158

2004

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Identifying and Removing Fast-Evolving Sites Using Compatibility Analysis: An Example from the Arthropoda

Systematic biology, 2004-12, Vol.53 (6), p.978-989

2004

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The Contest Between Parsimony and Likelihood

Systematic biology, 2004-08, Vol.53 (4), p.644-653

2004

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Resource-Aware Taxon Selection for Maximizing Phylogenetic Diversity

Systematic biology, 2007-06, Vol.56 (3), p.431-444

2007

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A Geometric Approach to Tree Shape Statistics

Systematic biology, 2006-08, Vol.55 (4), p.652-661

2006

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Estimation of Phylogeny and Invariant Sites under the General Markov Model of Nucleotide Sequence Evolution

Systematic biology, 2007-04, Vol.56 (2), p.155-162

2007

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Building Supertrees: An Empirical Assessment Using the Grass Family (Poaceae)

Systematic biology, 2002-01, Vol.51 (1), p.136-150

2002

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Missing the Forest for the Trees: Phylogenetic Compression and Its Implications for Inferring Complex Evolutionary Histories

Systematic biology, 2005-02, Vol.54 (1), p.146-157

2005

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Spectral Partitioning of Phylogenetic Data Sets Based on Compatibility

Systematic biology, 2007-08, Vol.56 (4), p.623-632

2007

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Discriminating Supported and Unsupported Relationships in Supertrees Using Triplets

Systematic biology, 2006-04, Vol.55 (2), p.345-350

2006

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Supertrees Are a Necessary Not-So-Evil: A Comment on Gatesy et al

Systematic biology, 2003-10, Vol.52 (5), p.724-729

2003

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The Information Content of Trees and Their Matrix Representations

Systematic biology, 2004-12, Vol.53 (6), p.989-1001

2004

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Intraorganismal Homology, Character Construction, and the Phylogeny of Aetosaurian Archosaurs (Reptilia, Diapsida)

Systematic biology, 2003-04, Vol.52 (2), p.239-252

2003

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THE (SUPER)TREE OF LIFE: Procedures, Problems, and Prospects

Annual review of ecology and systematics, 2002-11, Vol.33 (1), p.265-289

2002

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The Ancestral Distance Test: What Relatedness can Reveal about Correlated Evolution in Large Lineages with Missing Character Data and Incomplete Phylogenies

Systematic biology, 2006-10, Vol.55 (5), p.803-817

2006

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The Combinatorics of Tandem Duplication Trees

Systematic biology, 2003-02, Vol.52 (1), p.110-118

2003

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Inconsistency of Maximum Parsimony Revisited

Systematic biology, 2004-08, Vol.53 (4), p.521-528

2004

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Filtered Z-Closure Supernetworks for Extracting and Visualizing Recurrent Signal from Incongruent Gene Trees

Missing Data, Incomplete Taxa, and Phylogenetic Accuracy

Performance-Based Selection of Likelihood Models for Phylogeny Estimation

Which Random Processes Describe the Tree of Life? A Large-Scale Study of Phylogenetic Tree Imbalance

Evaluating Intraspecific “Network” Construction Methods Using Simulated Sequence Data: Do Existing Algorithms Outperform the Global Maximum Parsimony Approach?

Accepting Partnership by Submission? Morphological Phylogenetics in a Molecular Millennium

A Model of Horizontal Gene Transfer and the Bacterial Phylogeny Problem

Majority-Rule Supertrees

Phylogenetic super-networks from partial trees

Identifying and Removing Fast-Evolving Sites Using Compatibility Analysis: An Example from the Arthropoda

The Contest Between Parsimony and Likelihood

Resource-Aware Taxon Selection for Maximizing Phylogenetic Diversity

A Geometric Approach to Tree Shape Statistics

Estimation of Phylogeny and Invariant Sites under the General Markov Model of Nucleotide Sequence Evolution

Building Supertrees: An Empirical Assessment Using the Grass Family (Poaceae)

Missing the Forest for the Trees: Phylogenetic Compression and Its Implications for Inferring Complex Evolutionary Histories

Spectral Partitioning of Phylogenetic Data Sets Based on Compatibility

Discriminating Supported and Unsupported Relationships in Supertrees Using Triplets

Supertrees Are a Necessary Not-So-Evil: A Comment on Gatesy et al

The Information Content of Trees and Their Matrix Representations

Intraorganismal Homology, Character Construction, and the Phylogeny of Aetosaurian Archosaurs (Reptilia, Diapsida)

THE (SUPER)TREE OF LIFE: Procedures, Problems, and Prospects

The Ancestral Distance Test: What Relatedness can Reveal about Correlated Evolution in Large Lineages with Missing Character Data and Incomplete Phylogenies

The Combinatorics of Tandem Duplication Trees

Inconsistency of Maximum Parsimony Revisited

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