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Tumor purity adjusted beta values improve biological interpretability of high-dimensional DNA methylation data

PloS one, 2022-09, Vol.17 (9), p.e0265557-e0265557

2022

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GOBO: gene expression-based outcome for breast cancer online

PloS one, 2011-03, Vol.6 (3), p.e17911-e17911

2011

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Kataegis in clinical and molecular subgroups of primary breast cancer

NPJ breast cancer, 2024-04, Vol.10 (1), p.32-32

2024

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Random Forest Modelling of High-Dimensional Mixed-Type Data for Breast Cancer Classification

Cancers, 2021-02, Vol.13 (5), p.991

2021

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Improved detection of clinically relevant fusion transcripts in cancer by machine learning classification

BMC genomics, 2023-12, Vol.24 (1), p.783-783, Article 783

2023

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Molecular analyses of triple-negative breast cancer in the young and elderly

Breast cancer research : BCR, 2021-02, Vol.23 (1), p.20-20, Article 20

2021

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Comparison of SP142 and 22C3 PD-L1 assays in a population-based cohort of triple-negative breast cancer patients in the context of their clinically established scoring algorithms

Breast cancer research : BCR, 2023-10, Vol.25 (1), p.1-123, Article 123

2023

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Identification of New MicroRNAs in Paired Normal and Tumor Breast Tissue Suggests a Dual Role for the ERBB2/Her2 Gene

Cancer research (Chicago, Ill.), 2011, Vol.71 (1), p.78-86

2011

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Integrated genomic and gene expression profiling identifies two major genomic circuits in urothelial carcinoma

PloS one, 2012-06, Vol.7 (6), p.e38863-e38863

2012

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The circular RNome of primary breast cancer

Genome research, 2019-03, Vol.29 (3), p.356

2019

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Feasibility of EBUS-TBNA for histopathological and molecular diagnostics of NSCLC-A retrospective single-center experience

PloS one, 2022-02, Vol.17 (2), p.e0263342-e0263342

2022

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Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios

BMC bioinformatics, 2008-10, Vol.9 (1), p.409-409, Article 409

2008

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Identification and validation of single-sample breast cancer radiosensitivity gene expression predictors

Breast cancer research : BCR, 2018-07, Vol.20 (1), p.64-64, Article 64

2018

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Gene Expression Profiling of Large Cell Lung Cancer Links Transcriptional Phenotypes to the New Histological WHO 2015 Classification

Journal of thoracic oncology, 2017-08, Vol.12 (8), p.1257-1267

2017

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Molecular characteristics of breast tumors in patients screened for germline predisposition from a population-based observational study

Genome medicine, 2023-04, Vol.15 (1), p.25-25, Article 25

2023

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NF1‐mutated melanoma tumors harbor distinct clinical and biological characteristics

Molecular oncology, 2017-04, Vol.11 (4), p.438-451

2017

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MiRNA expression in urothelial carcinomas: Important roles of miR‐10a, miR‐222, miR‐125b, miR‐7 and miR‐452 for tumor stage and metastasis, and frequent homozygous losses of miR‐31

International journal of cancer, 2009-05, Vol.124 (9), p.2236-2242

2009

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An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells

Breast cancer research : BCR, 2016-02, Vol.18 (1), p.27-27, Article 27

2016

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Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration

Nature communications, 2016-09, Vol.7 (1), p.12910-12910, Article 12910

2016

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Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma

Molecular oncology, 2020-05, Vol.14 (5), p.933-950

2020

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Correction to: Molecular analyses of triple-negative breast cancer in the young and elderly

Breast cancer research : BCR, 2021-02, Vol.23 (1), p.28-28, Article 28

2021

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CA 19-9 and CA 125 as potential predictors of disease recurrence in resectable lung adenocarcinoma

PloS one, 2017-10, Vol.12 (10), p.e0186284-e0186284

2017

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Distinct mechanisms of resistance to fulvestrant treatment dictate level of ER independence and selective response to CDK inhibitors in metastatic breast cancer

Breast cancer research : BCR, 2021-02, Vol.23 (1), p.26-18, Article 26

2021

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Perturbation and stability of PAM50 subtyping in population-based primary invasive breast cancer

NPJ breast cancer, 2023-10, Vol.9 (1), p.83-83, Article 83

2023

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Tumor purity adjusted beta values improve biological interpretability of high-dimensional DNA methylation data

GOBO: gene expression-based outcome for breast cancer online

Kataegis in clinical and molecular subgroups of primary breast cancer

Random Forest Modelling of High-Dimensional Mixed-Type Data for Breast Cancer Classification

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

Improved detection of clinically relevant fusion transcripts in cancer by machine learning classification

Molecular analyses of triple-negative breast cancer in the young and elderly

Comparison of SP142 and 22C3 PD-L1 assays in a population-based cohort of triple-negative breast cancer patients in the context of their clinically established scoring algorithms

Identification of New MicroRNAs in Paired Normal and Tumor Breast Tissue Suggests a Dual Role for the ERBB2/Her2 Gene

Integrated genomic and gene expression profiling identifies two major genomic circuits in urothelial carcinoma

The circular RNome of primary breast cancer

Feasibility of EBUS-TBNA for histopathological and molecular diagnostics of NSCLC-A retrospective single-center experience

Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios

Identification and validation of single-sample breast cancer radiosensitivity gene expression predictors

Gene Expression Profiling of Large Cell Lung Cancer Links Transcriptional Phenotypes to the New Histological WHO 2015 Classification

Molecular characteristics of breast tumors in patients screened for germline predisposition from a population-based observational study

NF1‐mutated melanoma tumors harbor distinct clinical and biological characteristics

MiRNA expression in urothelial carcinomas: Important roles of miR‐10a, miR‐222, miR‐125b, miR‐7 and miR‐452 for tumor stage and metastasis, and frequent homozygous losses of miR‐31

An integrated genomics analysis of epigenetic subtypes in human breast tumors links DNA methylation patterns to chromatin states in normal mammary cells

Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration

Analysis of DNA methylation patterns in the tumor immune microenvironment of metastatic melanoma

Correction to: Molecular analyses of triple-negative breast cancer in the young and elderly

CA 19-9 and CA 125 as potential predictors of disease recurrence in resectable lung adenocarcinoma

Distinct mechanisms of resistance to fulvestrant treatment dictate level of ER independence and selective response to CDK inhibitors in metastatic breast cancer

Perturbation and stability of PAM50 subtyping in population-based primary invasive breast cancer

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