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Long Reads Are Revolutionizing 20 Years of Insect Genome Sequencing

Genome biology and evolution, 2021-08, Vol.13 (8)

2021

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Successful Recovery of Nuclear Protein-Coding Genes from Small Insects in Museums Using Illumina Sequencing

PloS one, 2015-12, Vol.10 (12), p.e0143929-e0143929

2015

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Re-collected after 55 years: a new species of Bembidion (Coleoptera, Carabidae) from California

ZooKeys, 2023-03, Vol.1156 (3), p.87-106

2023

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Draft Genome Assemblies and Annotations of Agrypnia vestita Walker, and Hesperophylax magnus Banks Reveal Substantial Repetitive Element Expansion in Tube Case-Making Caddisflies (Insecta: Trichoptera)

Genome biology and evolution, 2021-03, Vol.13 (3)

2021

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Ultraconserved element (UCE) probe set design: Base genome and initial design parameters critical for optimization

Ecology and evolution, 2019-06, Vol.9 (12), p.6933-6948

2019

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Climate oscillations, glacial refugia, and dispersal ability: factors influencing the genetic structure of the least salmonfly, Pteronarcella badia (Plecoptera), in Western North America

BMC evolutionary biology, 2015-12, Vol.15 (1), p.279, Article 279

2015

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Sequencing historical specimens: successful preparation of small specimens with low amounts of degraded DNA

Molecular ecology resources, 2017-11, Vol.17 (6), p.1183-1201

2017

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RepeatProfiler: A pipeline for visualization and comparative analysis of repetitive DNA profiles

Molecular ecology resources, 2021-04, Vol.21 (3), p.969-981

2021

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Pathways to polar adaptation in fishes revealed by long‐read sequencing

Molecular ecology, 2023-03, Vol.32 (6), p.1381-1397

2023

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Repetitive DNA Profiles Reveal Evidence of Rapid Genome Evolution and Reflect Species Boundaries in Ground Beetles

Systematic biology, 2020-11, Vol.69 (6), p.1137-1148

2020

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Dynamic Evolution of Euchromatic Satellites on the X Chromosome in Drosophila melanogaster and the simulans Clade

Molecular biology and evolution, 2020-08, Vol.37 (8), p.2241-2256

2020

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Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges

Genome research, 2023-10, Vol.33 (10), p.1708-1717

2023

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Species delimitation, classical taxonomy and genome skimming: a review of the ground beetle genus Lionepha (Coleoptera: Carabidae)

Zoological journal of the Linnean Society, 2020-08, Vol.189 (4), p.1313-1358

2020

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Origin and adaptive radiation of the exceptional and threatened bembidiine beetle fauna of St Helena (Coleoptera: Carabidae)

Zoological journal of the Linnean Society, 2020-08, Vol.189 (4), p.1155-1175

2020

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Cryptic species in the mountaintops: species delimitation and taxonomy of the Bembidion breve species group (Coleoptera: Carabidae) aided by genomic architecture of a century-old type specimen

Zoological journal of the Linnean Society, 2018-07, Vol.183 (3), p.556-583

2018

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Chromosome-Scale Genome Assembly of the Hexaploid Taiwanese Goosefoot “Djulis” (Chenopodium formosanum)

Genome biology and evolution, 2022-08, Vol.14 (8)

2022

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Genome size evolution in the diverse insect order Trichoptera

Gigascience, 2022-02, Vol.11

2022

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Comparative phylogeography of codistributed aquatic insects in western North America: insights into dispersal and regional patterns of genetic structure

Freshwater biology, 2014-10, Vol.59 (10), p.2051-2063

2014

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Phylogenomics of the major lineages of Bembidion and related ground beetles (Coleoptera: Carabidae: Bembidiini)

Insect systematics and diversity, 2024-09, Vol.8 (5)

2024

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Comparative phylogeography of codistributed aquatic insects in western N orth A merica: insights into dispersal and regional patterns of genetic structure

Freshwater biology, 2014-10, Vol.59 (10), p.2051-2063

2014

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Phylogeny of carabid beetles based upon DNA sequences (Coleoptera: Carabidae)

ARPHA conference abstracts, 2019-06, Vol.2

2019

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Successful Recovery of Nuclear Protein-Coding Genes from Small Insects in Museums Using Illumina Sequencing: e0143929

PloS one, 2015-12, Vol.10 (12)

2015

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Stoneflies of Unusual Size: Population Genetics and Systematics Within Pteronarcyidae (Plecoptera)

Sproul, John S

2012

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Characterization and molecular profiling of PSEN1 familial Alzheimer's disease iPSC-derived neural progenitors

PloS one, 2014-01, Vol.9 (1), p.e84547-e84547

2014

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The structure and properties of chromium nitride coatings deposited using dc, pulsed dc and modulated pulse power magnetron sputtering

Surface & coatings technology, 2010-04, Vol.204 (14), p.2230-2239

2010

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Long Reads Are Revolutionizing 20 Years of Insect Genome Sequencing

Successful Recovery of Nuclear Protein-Coding Genes from Small Insects in Museums Using Illumina Sequencing

Re-collected after 55 years: a new species of Bembidion (Coleoptera, Carabidae) from California

Draft Genome Assemblies and Annotations of Agrypnia vestita Walker, and Hesperophylax magnus Banks Reveal Substantial Repetitive Element Expansion in Tube Case-Making Caddisflies (Insecta: Trichoptera)

Ultraconserved element (UCE) probe set design: Base genome and initial design parameters critical for optimization

Climate oscillations, glacial refugia, and dispersal ability: factors influencing the genetic structure of the least salmonfly, Pteronarcella badia (Plecoptera), in Western North America

Sequencing historical specimens: successful preparation of small specimens with low amounts of degraded DNA

RepeatProfiler: A pipeline for visualization and comparative analysis of repetitive DNA profiles

Pathways to polar adaptation in fishes revealed by long‐read sequencing

Repetitive DNA Profiles Reveal Evidence of Rapid Genome Evolution and Reflect Species Boundaries in Ground Beetles

Dynamic Evolution of Euchromatic Satellites on the X Chromosome in Drosophila melanogaster and the simulans Clade

Analyses of 600+ insect genomes reveal repetitive element dynamics and highlight biodiversity-scale repeat annotation challenges

Species delimitation, classical taxonomy and genome skimming: a review of the ground beetle genus Lionepha (Coleoptera: Carabidae)

Origin and adaptive radiation of the exceptional and threatened bembidiine beetle fauna of St Helena (Coleoptera: Carabidae)

Cryptic species in the mountaintops: species delimitation and taxonomy of the Bembidion breve species group (Coleoptera: Carabidae) aided by genomic architecture of a century-old type specimen

Chromosome-Scale Genome Assembly of the Hexaploid Taiwanese Goosefoot “Djulis” (Chenopodium formosanum)

Genome size evolution in the diverse insect order Trichoptera

Comparative phylogeography of codistributed aquatic insects in western North America: insights into dispersal and regional patterns of genetic structure

Phylogenomics of the major lineages of Bembidion and related ground beetles (Coleoptera: Carabidae: Bembidiini)

Comparative phylogeography of codistributed aquatic insects in western N orth A merica: insights into dispersal and regional patterns of genetic structure

Phylogeny of carabid beetles based upon DNA sequences (Coleoptera: Carabidae)

Successful Recovery of Nuclear Protein-Coding Genes from Small Insects in Museums Using Illumina Sequencing: e0143929

Stoneflies of Unusual Size: Population Genetics and Systematics Within Pteronarcyidae (Plecoptera)

Characterization and molecular profiling of PSEN1 familial Alzheimer's disease iPSC-derived neural progenitors

The structure and properties of chromium nitride coatings deposited using dc, pulsed dc and modulated pulse power magnetron sputtering

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