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Single-Molecule FRET Spectroscopy and the Polymer Physics of Unfolded and Intrinsically Disordered Proteins

Annual review of biophysics, 2016-07, Vol.45 (1), p.207-231

2016

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Valence and patterning of aromatic residues determine the phase behavior of prion-like domains

Science (American Association for the Advancement of Science), 2020-02, Vol.367 (6478), p.694-699

2020

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Depletion interactions modulate the binding between disordered proteins in crowded environments

Proceedings of the National Academy of Sciences - PNAS, 2020-06, Vol.117 (24), p.13480-13489

2020

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Impact of In‐Cell and In‐Vitro Crowding on the Conformations and Dynamics of an Intrinsically Disordered Protein

Angewandte Chemie International Edition, 2021-05, Vol.60 (19), p.10724-10729

International ed. in English, 2021

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Polymer scaling laws of unfolded and intrinsically disordered proteins quantified with single-molecule spectroscopy

Proceedings of the National Academy of Sciences - PNAS, 2012-10, Vol.109 (40), p.16155-16160

2012

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The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA

Nature communications, 2021-03, Vol.12 (1), p.1936-1936, Article 1936

2021

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Integrated view of internal friction in unfolded proteins from single-molecule FRET, contact quenching, theory, and simulations

Proceedings of the National Academy of Sciences - PNAS, 2017-03, Vol.114 (10), p.E1833-E1839

2017

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A multi-step nucleation process determines the kinetics of prion-like domain phase separation

Nature communications, 2021-07, Vol.12 (1), p.4513-4513, Article 4513

2021

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Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments

Proceedings of the National Academy of Sciences - PNAS, 2014-04, Vol.111 (13), p.4874-4879

2014

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Charge interactions can dominate the dimensions of intrinsically disordered proteins

Proceedings of the National Academy of Sciences - PNAS, 2010-08, Vol.107 (33), p.14609-14614

2010

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Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells

Nature methods, 2015-08, Vol.12 (8), p.773-779

2015

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Consistent View of Polypeptide Chain Expansion in Chemical Denaturants from Multiple Experimental Methods

Journal of the American Chemical Society, 2016-09, Vol.138 (36), p.11714-11726

2016

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Comprehensive structural and dynamical view of an unfolded protein from the combination of single-molecule FRET, NMR, and SAXS

Proceedings of the National Academy of Sciences - PNAS, 2016-09, Vol.113 (37), p.E5389-E5398

2016

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Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy

Proceedings of the National Academy of Sciences - PNAS, 2012-10, Vol.109 (44), p.17800-17806

2012

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Branched unwinding mechanism of the Pif1 family of DNA helicases

Proceedings of the National Academy of Sciences - PNAS, 2019-12, Vol.116 (49), p.24533-24541

2019

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Physical basis of the disorder-order transition

Archives of biochemistry and biophysics, 2020-05, Vol.685, p.108305-108305, Article 108305

Soranno, Andrea

2020

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Transient misfolding dominates multidomain protein folding

Nature communications, 2015-11, Vol.6 (1), p.8861-8861, Article 8861

2015

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The Trap in the FRAP: A Cautionary Tale about Transport Measurements in Biomolecular Condensates

Biophysical journal, 2019-12, Vol.117 (11), p.2041-2042

Soranno, Andrea

2019

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Localizing internal friction along the reaction coordinate of protein folding by combining ensemble and single-molecule fluorescence spectroscopy

Nature communications, 2012-11, Vol.3 (1), p.1195-1195, Article 1195

2012

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Kinetics of Contact Formation and End-to-End Distance Distributions of Swollen Disordered Peptides

Biophysical journal, 2009-02, Vol.96 (4), p.1515-1528

2009

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Apolipoprotein E: Structural Insights and Links to Alzheimer Disease Pathogenesis

Neuron (Cambridge, Mass.), 2021-01, Vol.109 (2), p.205-221

2021

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Macromolecular Crowding and Intrinsically Disordered Proteins: A Polymer Physics Perspective

ChemSystemsChem, 2022-09, Vol.4 (5), p.n/a

2022

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Condensation Goes Viral: A Polymer Physics Perspective

Journal of molecular biology, 2023-08, Vol.435 (16), p.167988-167988, Article 167988

2023

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Conserved molecular recognition by an intrinsically disordered region in the absence of sequence conservation

Biophysical journal, 2024-02, Vol.123 (3), p.26a-26a

2024

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Extreme disorder in an ultrahigh-affinity protein complex

Nature (London), 2018-03, Vol.555 (7694), p.61-66

2018

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Single-Molecule FRET Spectroscopy and the Polymer Physics of Unfolded and Intrinsically Disordered Proteins

Valence and patterning of aromatic residues determine the phase behavior of prion-like domains

Depletion interactions modulate the binding between disordered proteins in crowded environments

Impact of In‐Cell and In‐Vitro Crowding on the Conformations and Dynamics of an Intrinsically Disordered Protein

Polymer scaling laws of unfolded and intrinsically disordered proteins quantified with single-molecule spectroscopy

The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA

Integrated view of internal friction in unfolded proteins from single-molecule FRET, contact quenching, theory, and simulations

A multi-step nucleation process determines the kinetics of prion-like domain phase separation

Single-molecule spectroscopy reveals polymer effects of disordered proteins in crowded environments

Charge interactions can dominate the dimensions of intrinsically disordered proteins

Single-molecule spectroscopy of protein conformational dynamics in live eukaryotic cells

Consistent View of Polypeptide Chain Expansion in Chemical Denaturants from Multiple Experimental Methods

Comprehensive structural and dynamical view of an unfolded protein from the combination of single-molecule FRET, NMR, and SAXS

Quantifying internal friction in unfolded and intrinsically disordered proteins with single-molecule spectroscopy

Branched unwinding mechanism of the Pif1 family of DNA helicases

Physical basis of the disorder-order transition

Transient misfolding dominates multidomain protein folding

The Trap in the FRAP: A Cautionary Tale about Transport Measurements in Biomolecular Condensates

Localizing internal friction along the reaction coordinate of protein folding by combining ensemble and single-molecule fluorescence spectroscopy

Kinetics of Contact Formation and End-to-End Distance Distributions of Swollen Disordered Peptides

Apolipoprotein E: Structural Insights and Links to Alzheimer Disease Pathogenesis

Macromolecular Crowding and Intrinsically Disordered Proteins: A Polymer Physics Perspective

Condensation Goes Viral: A Polymer Physics Perspective

Conserved molecular recognition by an intrinsically disordered region in the absence of sequence conservation

Extreme disorder in an ultrahigh-affinity protein complex

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