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Effects of Transcription Elongation Rate and Xrn2 Exonuclease Activity on RNA Polymerase II Termination Suggest Widespread Kinetic Competition

Molecular cell, 2015-10, Vol.60 (2), p.256-267

2015

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Control of RNA Pol II Speed by PNUTS-PP1 and Spt5 Dephosphorylation Facilitates Termination by a “Sitting Duck Torpedo” Mechanism

Molecular cell, 2019-12, Vol.76 (6), p.896-908.e4

2019

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RNA Pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD Phosphorylation, and Transcriptional Direction

Molecular cell, 2017-05, Vol.66 (4), p.546-557.e3

2017

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Selectable one-step PCR-mediated integration of a degron for rapid depletion of endogenous human proteins

BioTechniques, 2016-02, Vol.60 (2), p.69-74

2016

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clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 2; peer review: 2 approved]

F1000 research, 2020, Vol.9, p.223-223

2020

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Coupling of RNA Polymerase II Transcription Elongation with Pre-mRNA Splicing

Journal of molecular biology, 2016-06, Vol.428 (12), p.2623-2635

2016

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Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node

eLife, 2021-04, Vol.10

2021

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Elevated Detection of Dual Antibody B Cells Identifies Lupus Patients With B Cell-Reactive VH4-34 Autoantibodies

Frontiers in immunology, 2022-02, Vol.13, p.795209-795209

2022

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Widespread Backtracking by RNA Pol II Is a Major Effector of Gene Activation, 5′ Pause Release, Termination, and Transcription Elongation Rate

Molecular cell, 2019-01, Vol.73 (1), p.107-118.e4

2019

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Dynamic turnover of paused Pol II complexes at human promoters

Genes & development, 2018-09, Vol.32 (17-18), p.1215-1225

2018

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The pausing zone and control of RNA polymerase II elongation by Spt5: Implications for the pause-release model

Molecular cell, 2022-10, Vol.82 (19), p.3632-3645.e4

2022

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valr: Reproducible genome interval analysis in R

F1000 research, 2017, Vol.6, p.1025-1025

2017

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A dynamic RNA loop in an IRES affects multiple steps of elongation factor-mediated translation initiation

eLife, 2015-11, Vol.4

2015

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Precise gene models using long-read sequencing reveal a unique poly(A) signal in Giardia lamblia

RNA (Cambridge), 2022-05, Vol.28 (5), p.668-682

2022

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The SON RNA splicing factor is required for intracellular trafficking structures that promote centriole assembly and ciliogenesis

Molecular biology of the cell, 2021-10, Vol.32 (20), p.ar4-ar4

2021

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MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination

The EMBO journal, 2021-11, Vol.40 (22), p.e108966-n/a

2021

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Resident mesenchymal vascular progenitors modulate adaptive angiogenesis and pulmonary remodeling via regulation of canonical Wnt signaling

The FASEB journal, 2020-08, Vol.34 (8), p.10267-10285

2020

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Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO

JCI insight, 2024-01, Vol.9 (4)

2024

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clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 1; peer review: 2 approved with reservations]

F1000 research, 2020, Vol.9, p.223

2020

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Building an ecological momentary assessment smartphone app for 4- to 10-year-old children: A pilot study

PloS one, 2023-08, Vol.18 (8), p.e0290148-e0290148

2023

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Divergent discourse between protests and counter-protests: #BlackLivesMatter and #AllLivesMatter

PloS one, 2018-04, Vol.13 (4), p.e0195644-e0195644

2018

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Scribble modulates the MAPK/Fra1 pathway to disrupt luminal and ductal integrity and suppress tumour formation in the mammary gland

PLoS genetics, 2014-05, Vol.10 (5), p.e1004323-e1004323

2014

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Objective Estimates of the Probability of Death from Burn Injuries

The New England journal of medicine, 1998-02, Vol.338 (6), p.362-366

1998

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Effects of Transcription Elongation Rate and Xrn2 Exonuclease Activity on RNA Polymerase II Termination Suggest Widespread Kinetic Competition

Control of RNA Pol II Speed by PNUTS-PP1 and Spt5 Dephosphorylation Facilitates Termination by a “Sitting Duck Torpedo” Mechanism

RNA Pol II Dynamics Modulate Co-transcriptional Chromatin Modification, CTD Phosphorylation, and Transcriptional Direction

Selectable one-step PCR-mediated integration of a degron for rapid depletion of endogenous human proteins

clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 2; peer review: 2 approved]

Coupling of RNA Polymerase II Transcription Elongation with Pre-mRNA Splicing

Molecular tracking devices quantify antigen distribution and archiving in the murine lymph node

Elevated Detection of Dual Antibody B Cells Identifies Lupus Patients With B Cell-Reactive VH4-34 Autoantibodies

Widespread Backtracking by RNA Pol II Is a Major Effector of Gene Activation, 5′ Pause Release, Termination, and Transcription Elongation Rate

Dynamic turnover of paused Pol II complexes at human promoters

The pausing zone and control of RNA polymerase II elongation by Spt5: Implications for the pause-release model

valr: Reproducible genome interval analysis in R

Monocytic Subclones Confer Resistance to Venetoclax-Based Therapy in Patients with Acute Myeloid Leukemia

A dynamic RNA loop in an IRES affects multiple steps of elongation factor-mediated translation initiation

Precise gene models using long-read sequencing reveal a unique poly(A) signal in Giardia lamblia

The SON RNA splicing factor is required for intracellular trafficking structures that promote centriole assembly and ciliogenesis

MARCO+ lymphatic endothelial cells sequester arthritogenic alphaviruses to limit viremia and viral dissemination

Resident mesenchymal vascular progenitors modulate adaptive angiogenesis and pulmonary remodeling via regulation of canonical Wnt signaling

Chikungunya virus infection disrupts lymph node lymphatic endothelial cell composition and function via MARCO

clustifyr: an R package for automated single-cell RNA sequencing cluster classification [version 1; peer review: 2 approved with reservations]

Monocytic Subclones Confer Resistance to Venetoclax-Based Therapy in Acute Myeloid Leukemia Patients

Building an ecological momentary assessment smartphone app for 4- to 10-year-old children: A pilot study

Divergent discourse between protests and counter-protests: #BlackLivesMatter and #AllLivesMatter

Scribble modulates the MAPK/Fra1 pathway to disrupt luminal and ductal integrity and suppress tumour formation in the mammary gland

Objective Estimates of the Probability of Death from Burn Injuries

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