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Higher diversity and abundance of denitrifying microorganisms in environments than considered previously

The ISME Journal, 2015-09, Vol.9 (9), p.1954-1965

2015

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Effects of copper on nitrous oxide (N2O) reduction in denitrifiers and N2O emissions from agricultural soils

Biology and fertility of soils, 2020-01, Vol.56 (1), p.39-51

2020

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High soil microbial activity in the winter season enhances nitrogen cycling in a cool-temperate deciduous forest

Soil biology & biochemistry, 2018-09, Vol.124, p.90-100

2018

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Temporal shifts in diversity and quantity of nirS and nirK in a rice paddy field soil

Soil biology & biochemistry, 2009-10, Vol.41 (10), p.2044-2051

2009

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Soil microbial community response to winter climate change is phylogenetically conserved and highly resilient in a cool-temperate forest

Soil biology & biochemistry, 2022-02, Vol.165, p.108499, Article 108499

2022

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N2O emission from cropland field soil through fungal denitrification after surface applications of organic fertilizer

Soil biology & biochemistry, 2014-02, Vol.69, p.157-167

2014

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Mitigating N2O emissions from agricultural soils with fungivorous mites

The ISME Journal, 2021-08, Vol.15 (8), p.2427-2439

2021

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Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas

International journal of systematic and evolutionary microbiology, 2021-01, Vol.71 (1)

2021

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Consequences of microbial diversity in forest nitrogen cycling: diverse ammonifiers and specialized ammonia oxidizers

The ISME Journal, 2020-01, Vol.14 (1), p.12-25

2020

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Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics

Microbes and Environments, 2017, Vol.32(2), pp.180-183

2017

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1. Discovery of previously overlooked microbial drivers of nitrogen fixation in paddy soil, iron-reducing bacteria, and application to low nitrogen input agriculture: From omics analysis to sustainable agriculture

Japanese Journal of Soil Science and Plant Nutrition, 2023/06/05, Vol.94(3), pp.216-222

2023

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Undervalued Pseudo- nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

mSphere, 2021-12, Vol.6 (6), p.e0078521-e0078521

2021

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Revisiting the involvement of ammonia oxidizers and denitrifiers in nitrous oxide emission from cropland soils

Environmental pollution (1987), 2021-10, Vol.287, p.117494-117494, Article 117494

2021

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Single-cell analysis and isolation for microbiology and biotechnology: methods and applications

Applied microbiology and biotechnology, 2010-05, Vol.86 (5), p.1281-1292

2010

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Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of the Genus Geomonas gen. nov

Frontiers in microbiology, 2019-09, Vol.10, p.2201-2201

2019

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Highly abundant acidophilic ammonia-oxidizing archaea causes high rates of nitrification and nitrate leaching in nitrogen-saturated forest soils

Soil biology & biochemistry, 2018-07, Vol.122, p.220-227

2018

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Denitrification in paddy soil as a cooperative process of different nitrogen oxide reducers, revealed by metatranscriptomic analysis of denitrification-induced soil microcosm

Soil science and plant nutrition (Tokyo), 2019-07, Vol.65 (4), p.342-345

2019

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Identification and isolation of active N2O reducers in rice paddy soil

The ISME Journal, 2011-12, Vol.5 (12), p.1936-1945

2011

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Noviherbaspirillum denitrificans sp. nov., a denitrifying bacterium isolated from rice paddy soil and Noviherbaspirillum autotrophicum sp. nov., a denitrifying, facultatively autotrophic bacterium isolated from rice paddy soil and proposal to reclassify Herbaspirillum massiliense as Noviherbaspirillum massiliense comb. nov

International journal of systematic and evolutionary microbiology, 2017-06, Vol.67 (6), p.1841-1848

2017

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Isolation of Oligotrophic Denitrifiers Carrying Previously Uncharacterized Functional Gene Sequences

Applied and Environmental Microbiology, 2011-01, Vol.77 (1), p.338-342

2011

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Enhancement of the nitrogen-fixing activity of paddy soils owing to iron application

Soil science and plant nutrition (Tokyo), 2021-05, Vol.67 (3), p.243-247

2021

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Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome

Microbiome, 2024-05, Vol.12 (1), p.95-95, Article 95

2024

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Time-series analysis of phosphorus-depleted microbial communities in carbon/nitrogen-amended soils

Applied soil ecology : a section of Agriculture, ecosystems & environment, 2020-01, Vol.145, p.103346, Article 103346

2020

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Fine root biomass stimulates microbial activity of glucose mineralization in buried humic horizon of volcanic ash soils

Soil science and plant nutrition (Tokyo), 2020-09, Vol.66 (5), p.724-733

2020

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Nitrogen Cycling in Rice Paddy Environments: Past Achievements and Future Challenges

Microbes and Environments, 2011, Vol.26(4), pp.282-292

2011

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Higher diversity and abundance of denitrifying microorganisms in environments than considered previously

Effects of copper on nitrous oxide (N2O) reduction in denitrifiers and N2O emissions from agricultural soils

High soil microbial activity in the winter season enhances nitrogen cycling in a cool-temperate deciduous forest

Temporal shifts in diversity and quantity of nirS and nirK in a rice paddy field soil

Soil microbial community response to winter climate change is phylogenetically conserved and highly resilient in a cool-temperate forest

N2O emission from cropland field soil through fungal denitrification after surface applications of organic fertilizer

Mitigating N2O emissions from agricultural soils with fungivorous mites

Geomonas silvestris sp. nov., Geomonas paludis sp. nov. and Geomonas limicola sp. nov., isolated from terrestrial environments, and emended description of the genus Geomonas

Consequences of microbial diversity in forest nitrogen cycling: diverse ammonifiers and specialized ammonia oxidizers

Predominant but Previously-overlooked Prokaryotic Drivers of Reductive Nitrogen Transformation in Paddy Soils, Revealed by Metatranscriptomics

1. Discovery of previously overlooked microbial drivers of nitrogen fixation in paddy soil, iron-reducing bacteria, and application to low nitrogen input agriculture: From omics analysis to sustainable agriculture

Undervalued Pseudo- nifH Sequences in Public Databases Distort Metagenomic Insights into Biological Nitrogen Fixers

Revisiting the involvement of ammonia oxidizers and denitrifiers in nitrous oxide emission from cropland soils

Single-cell analysis and isolation for microbiology and biotechnology: methods and applications

Geomonas oryzae gen. nov., sp. nov., Geomonas edaphica sp. nov., Geomonas ferrireducens sp. nov., Geomonas terrae sp. nov., Four Ferric-Reducing Bacteria Isolated From Paddy Soil, and Reclassification of Three Species of the Genus Geobacter as Members of the Genus Geomonas gen. nov

Highly abundant acidophilic ammonia-oxidizing archaea causes high rates of nitrification and nitrate leaching in nitrogen-saturated forest soils

Denitrification in paddy soil as a cooperative process of different nitrogen oxide reducers, revealed by metatranscriptomic analysis of denitrification-induced soil microcosm

Identification and isolation of active N2O reducers in rice paddy soil

Isolation of Oligotrophic Denitrifiers Carrying Previously Uncharacterized Functional Gene Sequences

Enhancement of the nitrogen-fixing activity of paddy soils owing to iron application

Global soil metagenomics reveals distribution and predominance of Deltaproteobacteria in nitrogen-fixing microbiome

Time-series analysis of phosphorus-depleted microbial communities in carbon/nitrogen-amended soils

Fine root biomass stimulates microbial activity of glucose mineralization in buried humic horizon of volcanic ash soils

Nitrogen Cycling in Rice Paddy Environments: Past Achievements and Future Challenges

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