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Application of whole-genome sequencing for bacterial strain typing in molecular epidemiology

Journal of clinical microbiology, 2015-04, Vol.53 (4), p.1072-1079

2015

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Performance comparison of Illumina and ion torrent next-generation sequencing platforms for 16S rRNA-based bacterial community profiling

Applied and Environmental Microbiology, 2014-12, Vol.80 (24), p.7583-7591

2014

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Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections

PloS one, 2013-05, Vol.8 (5), p.e65226-e65226

2013

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Rapid Detection of Vancomycin-Intermediate Staphylococcus aureus by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Journal of clinical microbiology, 2016-04, Vol.54 (4), p.883-890

2016

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Clinical Next Generation Sequencing Outperforms Standard Microbiological Culture for Characterizing Polymicrobial Samples

Clinical chemistry (Baltimore, Md.), 2016-11, Vol.62 (11), p.1465-1473

2016

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Bartonella spp. Infections Identified by Molecular Methods, United States

Emerging infectious diseases, 2023-03, Vol.29 (3), p.467-476

2023

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Characterization of a multidrug-resistant, novel Bacteroides genomospecies

Emerging infectious diseases, 2015-01, Vol.21 (1), p.95-98

2015

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Whole-genome sequencing for high-resolution investigation of methicillin-resistant Staphylococcus aureus epidemiology and genome plasticity

Journal of clinical microbiology, 2014-08, Vol.52 (8), p.2787-2796

2014

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Coinfection of Fusobacterium nucleatum and Actinomyces israelii in mastoiditis diagnosed by next-generation DNA sequencing

Journal of clinical microbiology, 2014-05, Vol.52 (5), p.1789-1792

2014

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Neutrophilic inflammation in gallbladder carcinoma correlates with patient survival: A case-control study

Annals of diagnostic pathology, 2022-02, Vol.56, p.151845-151845, Article 151845

2022

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Genome Sequence of a Novel Species, Propionibacterium humerusii

Journal of Bacteriology, 2011-07, Vol.193 (14), p.3678-3678

2011

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Seasonal clustering of sinopulmonary mucormycosis in patients with hematologic malignancies at a large comprehensive cancer center

Antimicrobial resistance & infection control, 2017-12, Vol.6 (1), p.123-123, Article 123

2017

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Bartonella quintana Aortitis in a Man with AIDS, Diagnosed by Needle Biopsy and 16S rRNA Gene Amplification

Journal of clinical microbiology, 2015-08, Vol.53 (8), p.2773-2776

2015

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Molecular Diagnosis of Actinomadura madurae Infection by 16S rRNA Deep Sequencing

Journal of Clinical Microbiology, 2013-12, Vol.51 (12), p.4262-4265

2013

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Multifocal but non‐disseminated phaeohyphomycosis in a healthy man via a unique mechanism: Ejection from motor vehicle accident into a vegetable field in Afghanistan resulting in multiple contaminated skin wounds

Journal of cutaneous pathology, 2017-07, Vol.44 (7), p.620-624

2017

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Molecular Diagnosis of Subcutaneous Pythium insidiosum Infection by Use of PCR Screening and DNA Sequencing

Journal of Clinical Microbiology, 2012-04, Vol.50 (4), p.1480-1483

2012

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Erratum for Salipante et al., Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling

Applied and environmental microbiology, 2016-07, Vol.82 (14), p.4453-4453

2016

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Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates

International journal of medical microbiology, 2014-11, Vol.304 (8), p.1001-1010

2014

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Back Pain in a 23-Year-Old Male With X-Linked Chronic Granulomatous Disease

Open forum infectious diseases, 2019-11, Vol.6 (11)

2019

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Leptotrichia species isolated from a chronic recurrent corneal ulcer

American journal of ophthalmology case reports, 2021-09, Vol.23, p.101168, Article 101168

2021

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Incidental identification of Strongyloides stercoralis infection by broad-range 28S rDNA gene sequencing in a patient with a hematolymphoid malignancy

Diagnostic microbiology and infectious disease, 2016-12, Vol.86 (4), p.362-364

2016

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Molecular Diagnosis of Cystoisosporiasis Using Extended-Range PCR Screening

The Journal of molecular diagnostics : JMD, 2011-05, Vol.13 (3), p.359-362

2011

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Diagnosis of Neurocysticercosis by Detection of Taenia solium DNA Using a Global DNA Screening Platform

Clinical infectious diseases, 2009-01, Vol.48 (1), p.86-90

2009

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Ureaplasma urealyticum Continuous Ambulatory Peritoneal Dialysis-Associated Peritonitis Diagnosed by 16S rRNA Gene PCR

Journal of Clinical Microbiology, 2010-11, Vol.48 (11), p.4310-4312

2010

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A Three-Hybrid System to Detect RNA--Protein Interactions in vivo

Proceedings of the National Academy of Sciences - PNAS, 1996-08, Vol.93 (16), p.8496-8501

1996

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Application of whole-genome sequencing for bacterial strain typing in molecular epidemiology

Performance comparison of Illumina and ion torrent next-generation sequencing platforms for 16S rRNA-based bacterial community profiling

Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections

Rapid Detection of Vancomycin-Intermediate Staphylococcus aureus by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Clinical Next Generation Sequencing Outperforms Standard Microbiological Culture for Characterizing Polymicrobial Samples

Bartonella spp. Infections Identified by Molecular Methods, United States

Characterization of a multidrug-resistant, novel Bacteroides genomospecies

Whole-genome sequencing for high-resolution investigation of methicillin-resistant Staphylococcus aureus epidemiology and genome plasticity

Coinfection of Fusobacterium nucleatum and Actinomyces israelii in mastoiditis diagnosed by next-generation DNA sequencing

Neutrophilic inflammation in gallbladder carcinoma correlates with patient survival: A case-control study

Genome Sequence of a Novel Species, Propionibacterium humerusii

Seasonal clustering of sinopulmonary mucormycosis in patients with hematologic malignancies at a large comprehensive cancer center

Bartonella quintana Aortitis in a Man with AIDS, Diagnosed by Needle Biopsy and 16S rRNA Gene Amplification

Molecular Diagnosis of Actinomadura madurae Infection by 16S rRNA Deep Sequencing

Multifocal but non‐disseminated phaeohyphomycosis in a healthy man via a unique mechanism: Ejection from motor vehicle accident into a vegetable field in Afghanistan resulting in multiple contaminated skin wounds

Molecular Diagnosis of Subcutaneous Pythium insidiosum Infection by Use of PCR Screening and DNA Sequencing

Erratum for Salipante et al., Performance Comparison of Illumina and Ion Torrent Next-Generation Sequencing Platforms for 16S rRNA-Based Bacterial Community Profiling

Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates

Back Pain in a 23-Year-Old Male With X-Linked Chronic Granulomatous Disease

Leptotrichia species isolated from a chronic recurrent corneal ulcer

Incidental identification of Strongyloides stercoralis infection by broad-range 28S rDNA gene sequencing in a patient with a hematolymphoid malignancy

Molecular Diagnosis of Cystoisosporiasis Using Extended-Range PCR Screening

Diagnosis of Neurocysticercosis by Detection of Taenia solium DNA Using a Global DNA Screening Platform

Ureaplasma urealyticum Continuous Ambulatory Peritoneal Dialysis-Associated Peritonitis Diagnosed by 16S rRNA Gene PCR

A Three-Hybrid System to Detect RNA--Protein Interactions in vivo

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