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Identification and Quantification of Proteoforms by Mass Spectrometry

Proteomics (Weinheim), 2019-05, Vol.19 (10), p.e1800361-n/a

2019

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A multi-scale map of cell structure fusing protein images and interactions

Nature (London), 2021-12, Vol.600 (7889), p.536-542

2021

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Mapping the Multiscale Proteomic Organization of Cellular and Disease Phenotypes

Annual review of biomedical data science, 2024-01, Vol.7 (1), p.369-389

2024

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Mapping the multiscale structure of biological systems

Cell systems, 2021-06, Vol.12 (6), p.622-635

2021

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Compartmentalization of HP1 Proteins in Pluripotency Acquisition and Maintenance

Stem cell reports, 2018-02, Vol.10 (2), p.627-641

2018

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Improving Proteoform Identifications in Complex Systems Through Integration of Bottom-Up and Top-Down Data

Journal of proteome research, 2020-08, Vol.19 (8), p.3510-3517

2020

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Global Post-Translational Modification Discovery

Journal of proteome research, 2017-04, Vol.16 (4), p.1383-1390

2017

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A five-level classification system for proteoform identifications

Nature methods, 2019-10, Vol.16 (10), p.939-940

2019

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Proteoform Analysis and Construction of Proteoform Families in Proteoform Suite

Methods in molecular biology (Clifton, N.J.), 2022, Vol.2500, p.67

2022

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Exploring Factors Affecting Interest in Chemistry Faculty Careers Among Graduate Student Women: Results from a Local Pilot Study

Journal of chemical education, 2022-01, Vol.99 (1), p.92-103

2022

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Advanced Strategies for Proton-Transfer Reactions Coupled with Parallel Ion Parking on a 21 T FT-ICR MS for Intact Protein Analysis

Analytical chemistry (Washington), 2021-07, Vol.93 (26), p.9119-9128

2021

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Intact-Mass Analysis Facilitating the Identification of Large Human Heart Proteoforms

Analytical chemistry (Washington), 2019-09, Vol.91 (17), p.10937-10942

2019

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Construction of Human Proteoform Families from 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Top-Down Proteomic Data

Journal of proteome research, 2021-01, Vol.20 (1), p.317-325

2021

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Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database

Journal of proteome research, 2019-10, Vol.18 (10), p.3671-3680

2019

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Expanding Proteoform Identifications in Top-Down Proteomic Analyses by Constructing Proteoform Families

Analytical chemistry (Washington), 2018-01, Vol.90 (2), p.1325-1333

2018

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Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database

Journal of proteome research, 2017-11, Vol.16 (11), p.4156-4165

2017

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Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families

Journal of proteome research, 2018-01, Vol.17 (1), p.568-578

2018

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Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus

Journal of proteome research, 2021-04, Vol.20 (4), p.1997-2004

2021

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Identification and Quantification of Murine Mitochondrial Proteoforms Using an Integrated Top-Down and Intact-Mass Strategy

Journal of proteome research, 2018-10, Vol.17 (10), p.3526-3536

2018

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Micromolded Carbon Paste Microelectrodes for Electrogenerated Chemiluminescent Detection on Microfluidic Devices

ChemElectroChem, 2020-08, Vol.7 (15), p.3244-3252

2020

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Multi-modal contrastive learning of subcellular organization using DICE

Bioinformatics (Oxford, England), 2024-09, Vol.40 (Supplement_2), p.ii105-ii110

2024

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Electrogenerated Chemiluminescent Detection of Polyamines on a Microfluidic Device Using Micromolded Carbon Paste Microelectrodes

Electroanalysis (New York, N.Y.), 2022-12, Vol.34 (12), p.1928-1935

2022

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Construction of Human Proteoform Families from 21 Tesla FT-ICR Mass Spectrometry Top-Down Proteomic Data

Journal of proteome research, 2020-10, Vol.20 (1), p.317-325

2020

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Integrated Proteomic Strategies for Proteoform Discovery

Schaffer, Leah V

2020

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Abstract 2348: A global multiscale map of protein assemblies from integration of protein interactions and images

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.2348-2348

2024

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Identification and Quantification of Proteoforms by Mass Spectrometry

A multi-scale map of cell structure fusing protein images and interactions

Mapping the Multiscale Proteomic Organization of Cellular and Disease Phenotypes

Mapping the multiscale structure of biological systems

Compartmentalization of HP1 Proteins in Pluripotency Acquisition and Maintenance

Improving Proteoform Identifications in Complex Systems Through Integration of Bottom-Up and Top-Down Data

Global Post-Translational Modification Discovery

A five-level classification system for proteoform identifications

Proteoform Analysis and Construction of Proteoform Families in Proteoform Suite

Exploring Factors Affecting Interest in Chemistry Faculty Careers Among Graduate Student Women: Results from a Local Pilot Study

Advanced Strategies for Proton-Transfer Reactions Coupled with Parallel Ion Parking on a 21 T FT-ICR MS for Intact Protein Analysis

Intact-Mass Analysis Facilitating the Identification of Large Human Heart Proteoforms

Construction of Human Proteoform Families from 21 Tesla Fourier Transform Ion Cyclotron Resonance Mass Spectrometry Top-Down Proteomic Data

Constructing Human Proteoform Families Using Intact-Mass and Top-Down Proteomics with a Multi-Protease Global Post-Translational Modification Discovery Database

Expanding Proteoform Identifications in Top-Down Proteomic Analyses by Constructing Proteoform Families

Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database

Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families

Binary Classifier for Computing Posterior Error Probabilities in MetaMorpheus

Identification and Quantification of Murine Mitochondrial Proteoforms Using an Integrated Top-Down and Intact-Mass Strategy

Micromolded Carbon Paste Microelectrodes for Electrogenerated Chemiluminescent Detection on Microfluidic Devices

Multi-modal contrastive learning of subcellular organization using DICE

Electrogenerated Chemiluminescent Detection of Polyamines on a Microfluidic Device Using Micromolded Carbon Paste Microelectrodes

Construction of Human Proteoform Families from 21 Tesla FT-ICR Mass Spectrometry Top-Down Proteomic Data

Integrated Proteomic Strategies for Proteoform Discovery

Abstract 2348: A global multiscale map of protein assemblies from integration of protein interactions and images

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