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Normal‐mode driven exploration of protein domain motions

Journal of computational chemistry, 2021-12, Vol.42 (31), p.2250-2257

Sanejouand, Yves‐Henri

2021

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Numerous severely twisted N‐acetylglucosamine conformations found in the protein databank

Proteins, structure, function, and bioinformatics, 2020-10, Vol.88 (10), p.1376-1383

2020

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Jumping between protein conformers using normal modes

Journal of computational chemistry, 2017-07, Vol.38 (18), p.1622-1630

2017

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Rational Enzyme Design without Structural Knowledge: A Sequence‐Based Approach for Efficient Generation of Transglycosylases

Chemistry : a European journal, 2021-07, Vol.27 (40), p.10323-10334

2021

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On the Unknown Proteins of Eukaryotic Proteomes

Journal of molecular evolution, 2023-08, Vol.91 (4), p.492-501

Sanejouand, Yves-Henri

2023

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At least three xenon binding sites in the glycine binding domain of the N-methyl D-aspartate receptor

Archives of biochemistry and biophysics, 2022-07, Vol.724, p.109265-109265, Article 109265

Sanejouand, Yves-Henri

2022

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NORMA: a tool for flexible fitting of high-resolution protein structures into low-resolution electron-microscopy-derived density maps

Acta crystallographica. Section D, Biological crystallography., 2006-09, Vol.62 (9), p.1098-1100

2006

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A framework for the next generation of stationary cosmological models

International journal of modern physics. D, Gravitation, astrophysics, cosmology, 2022-07, Vol.31 (10)

sanejouand, Yves-Henri

2022

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Building-block approach for determining low-frequency normal modes of macromolecules

Proteins, structure, function, and bioinformatics, 2000-10, Vol.41 (1), p.1-7

2000

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Knowledge-based prediction of protein backbone conformation using a structural alphabet

PloS one, 2017-11, Vol.12 (11), p.e0186215-e0186215

2017

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On the relationship between low-frequency normal modes and the large-scale conformational changes of proteins

Archives of biochemistry and biophysics, 2015-02, Vol.567 (18), p.59-65

2015

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Conserved Water Molecules in Family 1 Glycosidases: A DXMS and Molecular Dynamics Study

Biochemistry (Easton), 2013-08, Vol.52 (34), p.5900-5910

2013

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On the vibrational free energy of hydrated proteins

Physical biology, 2021-05, Vol.18 (3), p.036003-036003

Sanejouand, Yves-Henri

2021

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A singular mutation in the hemagglutinin of the 1918 pandemic virus

Archives of biochemistry and biophysics, 2017-07, Vol.625-626, p.13-16

Sanejouand, Yves-Henri

2017

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Use of a structural alphabet to find compatible folds for amino acid sequences

Protein science, 2015-01, Vol.24 (1), p.145-153

2015

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ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

Nucleic acids research, 2004-07, Vol.32 (Web Server issue), p.W610-W614

2004

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Toward the design of efficient transglycosidases: the case of the GH1 of Thermus thermophilus

Protein engineering, design and selection, 2019-12, Vol.32 (7), p.309-316

2019

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Semi-rational approach for converting a GH1 β-glycosidase into a β-transglycosidase

Protein engineering, design and selection, 2014-01, Vol.27 (1), p.13-19

2014

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Semi-rational approach for converting a GH36 α-glycosidase into an α-transglycosidase

Glycobiology (Oxford), 2015-04, Vol.25 (4), p.420-427

2015

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Internal Water Dynamics Control the Transglycosylation/Hydrolysis Balance in the Agarase (AgaD) of Zobellia galactanivorans

ACS catalysis, 2017-05, Vol.7 (5), p.3357-3367

2017

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Domain swapping of CD4 upon dimerization

Proteins, structure, function, and bioinformatics, 2004-10, Vol.57 (1), p.205-212

Sanejouand, Yves-Henri

2004

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Evidence for a Domain-Swapped CD4 Dimer as the Coreceptor for Binding to Class II MHC

Journal of Immunology, 2006-06, Vol.176 (11), p.6873-6878

2006

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Long-range energy transfer in proteins

Physical biology, 2009-12, Vol.6 (4), p.046014-046014

2009

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Hinge-bending motion in citrate synthase arising from normal mode calculations

Proteins, structure, function, and bioinformatics, 1995-12, Vol.23 (4), p.557-560

1995

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Nonspecific lipid-transfer protein genes expression in grape (Vitis sp.) cells in response to fungal elicitor treatments

Molecular plant-microbe interactions, 2003-05, Vol.16 (5), p.456-464

2003

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Normal‐mode driven exploration of protein domain motions

Numerous severely twisted N‐acetylglucosamine conformations found in the protein databank

Jumping between protein conformers using normal modes

Rational Enzyme Design without Structural Knowledge: A Sequence‐Based Approach for Efficient Generation of Transglycosylases

On the Unknown Proteins of Eukaryotic Proteomes

At least three xenon binding sites in the glycine binding domain of the N-methyl D-aspartate receptor

NORMA: a tool for flexible fitting of high-resolution protein structures into low-resolution electron-microscopy-derived density maps

A framework for the next generation of stationary cosmological models

Building-block approach for determining low-frequency normal modes of macromolecules

Knowledge-based prediction of protein backbone conformation using a structural alphabet

On the relationship between low-frequency normal modes and the large-scale conformational changes of proteins

Conserved Water Molecules in Family 1 Glycosidases: A DXMS and Molecular Dynamics Study

On the vibrational free energy of hydrated proteins

A singular mutation in the hemagglutinin of the 1918 pandemic virus

Use of a structural alphabet to find compatible folds for amino acid sequences

ElNemo: a normal mode web server for protein movement analysis and the generation of templates for molecular replacement

Toward the design of efficient transglycosidases: the case of the GH1 of Thermus thermophilus

Semi-rational approach for converting a GH1 β-glycosidase into a β-transglycosidase

Semi-rational approach for converting a GH36 α-glycosidase into an α-transglycosidase

Internal Water Dynamics Control the Transglycosylation/Hydrolysis Balance in the Agarase (AgaD) of Zobellia galactanivorans

Domain swapping of CD4 upon dimerization

Evidence for a Domain-Swapped CD4 Dimer as the Coreceptor for Binding to Class II MHC

Long-range energy transfer in proteins

Hinge-bending motion in citrate synthase arising from normal mode calculations

Nonspecific lipid-transfer protein genes expression in grape (Vitis sp.) cells in response to fungal elicitor treatments

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