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TDP-43 proteinopathy in ALS is triggered by loss of ASRGL1 and associated with HML-2 expression

Nature communications, 2024-05, Vol.15 (1), p.4163-24, Article 4163

2024

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The E. coli thioredoxin folding mechanism: The key role of the C-terminal helix

Biochimica et biophysica acta, 2015-02, Vol.1854 (2), p.127-137

2015

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Evolution of Linear Motifs within the Papillomavirus E7 Oncoprotein

Journal of molecular biology, 2012-09, Vol.422 (3), p.336-346

2012

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Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics

Nucleic acids research, 2008-02, Vol.36 (3), p.756-769

2008

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The eukaryotic linear motif resource ELM: 10 years and counting

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D259-D266

2014

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Solvent constraints for biopolymer folding and evolution in extraterrestrial environments

Proceedings of the National Academy of Sciences - PNAS, 2024-05, Vol.121 (21), p.e2318905121

2024

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The evolving copiotrophic/oligotrophic dichotomy: From Winogradsky to physiology and genomics

Environmental microbiology, 2023-07, Vol.25 (7), p.1232-1237

2023

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Conformational buffering underlies functional selection in intrinsically disordered protein regions

Nature structural & molecular biology, 2022-08, Vol.29 (8), p.781-790

2022

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Prediction of Spontaneous Protein Deamidation from Sequence-Derived Secondary Structure and Intrinsic Disorder

PloS one, 2015-12, Vol.10 (12), p.e0145186-e0145186

2015

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Thousands of protein linear motif classes may still be undiscovered

PloS one, 2021-05, Vol.16 (5), p.e0248841-e0248841

2021

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r/K selection of GC content in prokaryotes

Environmental microbiology, 2023-12, Vol.25 (12), p.3255-3268

2023

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Ecology theory disentangles microbial dichotomies

Environmental microbiology, 2023-12, Vol.25 (12), p.3052-3063

2023

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Mutational analysis of kinetic partitioning in protein folding and protein–DNA binding

Protein engineering, design and selection, 2011-01, Vol.24 (1-2), p.179-184

2011

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Molecular Information Theory Meets Protein Folding

The journal of physical chemistry. B, 2022-11, Vol.126 (43), p.8655-8668

2022

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NGOME-Lite: Proteome-wide prediction of spontaneous protein deamidation highlights differences between taxa

Methods (San Diego, Calif.), 2022-04, Vol.200, p.15-22

2022

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Associating protein sequence positions with the modulation of quantitative phenotypes

Archives of biochemistry and biophysics, 2024-05, Vol.755, p.109979-109979, Article 109979

2024

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Detecting Repetitions and Periodicities in Proteins by Tiling the Structural Space

The journal of physical chemistry. B, 2013-10, Vol.117 (42), p.12887-12897

2013

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Kinetic Recognition of the Retinoblastoma Tumor Suppressor by a Specific Protein Target

Journal of molecular biology, 2011-09, Vol.412 (2), p.267-284

2011

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Host diversification is concurrent with linear motif evolution in a Mastadenovirus hub protein

Journal of molecular biology, 2022-05, Vol.434 (10), p.167563-167563, Article 167563

2022

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Interplay between sequence, structure and linear motifs in the adenovirus E1A hub protein

Virology (New York, N.Y.), 2018-12, Vol.525, p.117-131

2018

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Hidden Structural Codes in Protein Intrinsic Disorder

Biochemistry (Easton), 2017-10, Vol.56 (41), p.5560-5569

2017

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Deamidation drives molecular aging of the SARS-CoV-2 spike protein receptor-binding motif

The Journal of biological chemistry, 2021-10, Vol.297 (4), p.101175-101175, Article 101175

2021

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Cysteine-Rich Positions Outside the Structural Zinc Motif of Human Papillomavirus E7 Provide Conformational Modulation and Suggest Functional Redox Roles

Biochemistry (Easton), 2014-03, Vol.53 (10), p.1680-1696

2014

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Detailing Protein Landscapes under Pressure

Biophysical journal, 2016-12, Vol.111 (11), p.2339-2341

2016

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Amino Acid metabolism conflicts with protein diversity

Molecular biology and evolution, 2014-11, Vol.31 (11), p.2905-2912

2014

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TDP-43 proteinopathy in ALS is triggered by loss of ASRGL1 and associated with HML-2 expression

The E. coli thioredoxin folding mechanism: The key role of the C-terminal helix

Evolution of Linear Motifs within the Papillomavirus E7 Oncoprotein

Comprehensive comparison of the interaction of the E2 master regulator with its cognate target DNA sites in 73 human papillomavirus types by sequence statistics

The eukaryotic linear motif resource ELM: 10 years and counting

Solvent constraints for biopolymer folding and evolution in extraterrestrial environments

The evolving copiotrophic/oligotrophic dichotomy: From Winogradsky to physiology and genomics

Conformational buffering underlies functional selection in intrinsically disordered protein regions

Prediction of Spontaneous Protein Deamidation from Sequence-Derived Secondary Structure and Intrinsic Disorder

Thousands of protein linear motif classes may still be undiscovered

r/K selection of GC content in prokaryotes

Ecology theory disentangles microbial dichotomies

Mutational analysis of kinetic partitioning in protein folding and protein–DNA binding

Molecular Information Theory Meets Protein Folding

NGOME-Lite: Proteome-wide prediction of spontaneous protein deamidation highlights differences between taxa

Associating protein sequence positions with the modulation of quantitative phenotypes

Detecting Repetitions and Periodicities in Proteins by Tiling the Structural Space

Kinetic Recognition of the Retinoblastoma Tumor Suppressor by a Specific Protein Target

Host diversification is concurrent with linear motif evolution in a Mastadenovirus hub protein

Interplay between sequence, structure and linear motifs in the adenovirus E1A hub protein

Hidden Structural Codes in Protein Intrinsic Disorder

Deamidation drives molecular aging of the SARS-CoV-2 spike protein receptor-binding motif

Cysteine-Rich Positions Outside the Structural Zinc Motif of Human Papillomavirus E7 Provide Conformational Modulation and Suggest Functional Redox Roles

Detailing Protein Landscapes under Pressure

Amino Acid metabolism conflicts with protein diversity

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