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5-Methylpyrimidines and Their Modifications in DNA

Reference Module in Chemistry, Molecular Sciences and Chemical Engineering, 2013

2013

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Abstract 1368: Discovery and characterization of C5-methylpyrimidine DNA hypermodification pathways

The Journal of biological chemistry, 2023, Vol.299 (3), p.103734, Article 103734

2023

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Abstract 820: Enzymatic Methyl-Seq: methylome analysis of challenging DNA samples

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13_Supplement), p.820-820

2019

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Active Site Probes for Yeast OMP Decarboxylase: Inhibition Constants of UMP and Thio-Substituted UMP Analogues and Greatly Reduced Activity toward CMP-6-Carboxylate

Bioorganic chemistry, 1999-08, Vol.27 (4), p.297-306

1999

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Addition of Oxygen to the Diiron(II/II) Cluster Is the Slowest Step in Formation of the Tyrosyl Radical in the W103Y Variant of Ribonucleotide Reductase Protein R2 from Mouse

Biochemistry (Easton), 2007-11, Vol.46 (45), p.13067-13073

2007

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The Association of Age and Gender with the Histopathological Features among Thyroid Cancer Patients in Erbil City, Iraq: Clinical Analysis of 153 Cases

Iraqi journal of science, 2023-11, p.5554-5563

2023

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Biochemical and structural insight into the iterative oxidation mechanism of deoxy‐5‐methylcytosine on DNA by a Naegleria gruberi enzyme, 5‐methylpyrimidine dioxygenase 1 (768.16)

The FASEB journal, 2014-04, Vol.28 (S1), p.n/a

2014

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Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosine

Proceedings of the National Academy of Sciences - PNAS, 2015-04, Vol.112 (14), p.4316-4321

2015

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Biochemical characterization of aNaegleriaTET-like oxygenase and its application in single molecule sequencing of 5-methylcytosine

Proceedings of the National Academy of Sciences - PNAS, 2015-04, Vol.112 (14), p.4316-4321

2015

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Biochemical characterization of two evolutionary distant ten‐eleven translocation enzymes and their utility in 5‐methylcytosine sequencing in the genomes at single‐base resolution

The FASEB journal, 2016-04, Vol.30 (S1)

2016

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Branched Activation- and Catalysis-Specific Pathways for Electron Relay to the Manganese/Iron Cofactor in Ribonucleotide Reductase from Chlamydia trachomatis

Biochemistry (Easton), 2008-08, Vol.47 (33), p.8477-8484

2008

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Branched Activation- and Catalysis-Specific Pathways for Electron Relay to the Manganese/Iron Cofactor in Ribonucleotide Reductase from Chlamydia trachomatis super([dagger])

Biochemistry (Easton), 2008-01, Vol.47 (33), p.8477-8484

2008

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Branched Intermediate Formation Is the Slowest Step in the Protein Splicing Reaction of the Ala1 KlbA Intein from Methanococcus jannaschii

Biochemistry (Easton), 2011-12, Vol.50 (49), p.10576-10589

2011

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Cation Mediation of Radical Transfer between Trp48 and Tyr356 during O 2 Activation by Protein R2 of Escherichia coli Ribonucleotide Reductase: Relevance to R1−R2 Radical Transfer in Nucleotide Reduction?

Biochemistry (Easton), 2006-07, Vol.45 (29), p.8823-8830

2006

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Cation Mediation of Radical Transfer between Trp48 and Tyr356 during O2 Activation by Protein R2 of Escherichia coli Ribonucleotide Reductase: Relevance to R1−R2 Radical Transfer in Nucleotide Reduction?

Biochemistry (Easton), 2006-07, Vol.45 (29), p.8823-8830

2006

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Chapter 9 - Site-directed Chemical Modification of Phage Particles

Phage Nanobiotechnology, 2011, p.202-219

2011

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Characteristics of Patients Admitted to the Burn and Plastic Surgery Unit: A Tertiary Center Experience in Bahrain

World journal of plastic surgery, 2022-03, Vol.11 (1), p.125-131

2022

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Characterization of NO adducts of the diiron center in protein R2 of Escherichia coli ribonucleotide reductase and site-directed variants; implications for the O2 activation mechanism

Journal of biological inorganic chemistry, 2004-10, Vol.9 (7), p.818-827

2004

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Characterization of RimO, a New Member of the Methylthiotransferase Subclass of the Radical SAM Superfamily

Biochemistry (Easton), 2009-10, Vol.48 (42), p.10162-10174

2009

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Circular dichroism and magnetic circular dichroism studies of the reduced binuclear non-heme iron sites of D84E and D84E/W48F ribonucleotide reductase mutants. Comparison to reduced methane monooxygenase and contributions to O2 reactivity

Journal of inorganic biochemistry, 2003-07, Vol.96 (1), p.250-250

2003

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Detection of TET-Oxidized 5-Methylcytosine Bases by Capillary Gel Electrophoresis

Methods in molecular biology (Clifton, N.J.), 2021, Vol.2198, p.137

2021

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Direct Spectroscopic Evidence for a High-Spin Fe(IV) Intermediate in Tyrosine Hydroxylase

Journal of the American Chemical Society, 2007-09, Vol.129 (37), p.11334-11335

2007

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Distributive Processing by the Iron(II)/α-Ketoglutarate-Dependent Catalytic Domains of the TET Enzymes Is Consistent with Epigenetic Roles for Oxidized 5‑Methylcytosine Bases

Journal of the American Chemical Society, 2016-08, Vol.138 (30), p.9345-9348

2016

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Electron transfer in tyrosyl radical formation in the R2 subunit of mouse ribonucleotide reductase

Journal of inorganic biochemistry, 2003-07, Vol.96 (1), p.261-261

2003

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5-Methylpyrimidines and Their Modifications in DNA

Abstract 1368: Discovery and characterization of C5-methylpyrimidine DNA hypermodification pathways

Abstract 820: Enzymatic Methyl-Seq: methylome analysis of challenging DNA samples

Active Site Probes for Yeast OMP Decarboxylase: Inhibition Constants of UMP and Thio-Substituted UMP Analogues and Greatly Reduced Activity toward CMP-6-Carboxylate

Addition of Oxygen to the Diiron(II/II) Cluster Is the Slowest Step in Formation of the Tyrosyl Radical in the W103Y Variant of Ribonucleotide Reductase Protein R2 from Mouse

The Association of Age and Gender with the Histopathological Features among Thyroid Cancer Patients in Erbil City, Iraq: Clinical Analysis of 153 Cases

Biochemical and structural insight into the iterative oxidation mechanism of deoxy‐5‐methylcytosine on DNA by a Naegleria gruberi enzyme, 5‐methylpyrimidine dioxygenase 1 (768.16)

Biochemical characterization of a Naegleria TET-like oxygenase and its application in single molecule sequencing of 5-methylcytosine

Biochemical characterization of aNaegleriaTET-like oxygenase and its application in single molecule sequencing of 5-methylcytosine

Biochemical characterization of two evolutionary distant ten‐eleven translocation enzymes and their utility in 5‐methylcytosine sequencing in the genomes at single‐base resolution

Branched Activation- and Catalysis-Specific Pathways for Electron Relay to the Manganese/Iron Cofactor in Ribonucleotide Reductase from Chlamydia trachomatis

Branched Activation- and Catalysis-Specific Pathways for Electron Relay to the Manganese/Iron Cofactor in Ribonucleotide Reductase from Chlamydia trachomatis super([dagger])

Branched Intermediate Formation Is the Slowest Step in the Protein Splicing Reaction of the Ala1 KlbA Intein from Methanococcus jannaschii

Cation Mediation of Radical Transfer between Trp48 and Tyr356 during O 2 Activation by Protein R2 of Escherichia coli Ribonucleotide Reductase: Relevance to R1−R2 Radical Transfer in Nucleotide Reduction?

Cation Mediation of Radical Transfer between Trp48 and Tyr356 during O2 Activation by Protein R2 of Escherichia coli Ribonucleotide Reductase: Relevance to R1−R2 Radical Transfer in Nucleotide Reduction?

Chapter 9 - Site-directed Chemical Modification of Phage Particles

Characteristics of Patients Admitted to the Burn and Plastic Surgery Unit: A Tertiary Center Experience in Bahrain

Characterization of NO adducts of the diiron center in protein R2 of Escherichia coli ribonucleotide reductase and site-directed variants; implications for the O2 activation mechanism

Characterization of RimO, a New Member of the Methylthiotransferase Subclass of the Radical SAM Superfamily

Circular dichroism and magnetic circular dichroism studies of the reduced binuclear non-heme iron sites of D84E and D84E/W48F ribonucleotide reductase mutants. Comparison to reduced methane monooxygenase and contributions to O2 reactivity

COVID-19 vaccination acceptance among Syrian population: a nationwide cross-sectional study

Detection of TET-Oxidized 5-Methylcytosine Bases by Capillary Gel Electrophoresis

Direct Spectroscopic Evidence for a High-Spin Fe(IV) Intermediate in Tyrosine Hydroxylase

Distributive Processing by the Iron(II)/α-Ketoglutarate-Dependent Catalytic Domains of the TET Enzymes Is Consistent with Epigenetic Roles for Oxidized 5‑Methylcytosine Bases

Electron transfer in tyrosyl radical formation in the R2 subunit of mouse ribonucleotide reductase

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