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Using data-independent, high-resolution mass spectrometry in protein biomarker research: Perspectives and clinical applications

Proteomics. Clinical applications, 2015-04, Vol.9 (3-4), p.307-321

2015

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Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells

Nature communications, 2017-10, Vol.8 (1), p.1212-15, Article 1212

2017

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Diagnostics and correction of batch effects in large‐scale proteomic studies: a tutorial

Molecular systems biology, 2021-08, Vol.17 (8), p.e10240-n/a

2021

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Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry

Cell reports (Cambridge), 2017-03, Vol.18 (13), p.3219-3226

2017

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A new class of protein biomarkers based on subcellular distribution: application to a mouse liver cancer model

Scientific reports, 2019-05, Vol.9 (1), p.6913, Article 6913

2019

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Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS

Cell reports (Cambridge), 2018-05, Vol.23 (9), p.2819-2831.e5

2018

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Comparison of three detergent-free protein extraction protocols for white adipose tissue

Analytical biochemistry, 2011-08, Vol.415 (2), p.215-217

2011

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STAT6 promotes bi-directional modulation of PKM2 in liver and adipose inflammatory cells in rosiglitazone-treated mice

Scientific reports, 2013-08, Vol.3 (1), p.2350-2350, Article 2350

2013

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Abstract 6482: Activity based protein profiling by SWATH/DIA-MS mode (ABPP-SWATH/DIA-MS) from OCT-embedded tissues biopsies reveals lung tumor-specific protease profiles

Cancer research (Chicago, Ill.), 2020-08, Vol.80 (16_Supplement), p.6482-6482

2020

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Abstract 4934: Modified SWATH MS analysis of serine hydrolase activity in lung adenocarcinoma

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13_Supplement), p.4934-4934

2019

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Cadmium acute exposure induces metabolic and transcriptomic perturbations in human mature adipocytes

Toxicology (Amsterdam), 2022-03, Vol.470, p.153153-153153, Article 153153

2022

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Arsenic induces metabolome remodeling in mature human adipocytes

Toxicology (Amsterdam), 2023-12, Vol.500, p.153672-153672, Article 153672

2023

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Blood proteome of acute intracranial hemorrhage in infant victims of abusive head trauma

Proteomics (Weinheim), 2023-02, Vol.23 (3-4), p.e2200078-n/a

2023

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SMYD3: a new regulator of adipocyte precursor proliferation at the early steps of differentiation

International Journal of Obesity, 2024-04, Vol.48 (4), p.557-566

2024

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Global and precise identification of functional miRNA targets in mESCs by integrative analysis

EMBO reports, 2022-09, Vol.23 (9), p.e54762-n/a

2022

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Abstract 5302: Unmasking aggressive tumor profiles in lung adenocarcinomas through the molecular abundances and catalytic action of serine hydrolases

Cancer research (Chicago, Ill.), 2023-04, Vol.83 (7_Supplement), p.5302-5302

2023

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Comparison of fractionation strategies for offline two-dimensional liquid chromatography tandem mass spectrometry analysis of proteins from mouse adipose tissue

Analytical biochemistry, 2015-09, Vol.484, p.122-132

2015

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Abstract 1887: Discrimination of aggressive tumor profiles in lung adenocarcinomas using activity based protein profiling by SWATH/DIA-MS mode

Cancer research (Chicago, Ill.), 2022-06, Vol.82 (12_Supplement), p.1887-1887

2022

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The CUL4B‐based E3 ubiquitin ligase regulates mitosis and brain development by recruiting phospho‐specific DCAFs

The EMBO journal, 2023-09, Vol.42 (17), p.e112847-n/a

2023

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Differential Proteomic Analysis of STAT6 Knockout Mice Reveals New Regulatory Function in Liver Lipid Homeostasis

Journal of proteome research, 2009-10, Vol.8 (10), p.4511-4524

2009

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Exploration des métabolites circulants chez les enfants ayant subi un traumatisme crânien abusif

Toxicologie Analytique et Clinique, 2024-06, Vol.36 (2), p.S32-S33

2024

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First report on the nationwide incidence of type 1 diabetes and ketoacidosis at onset in children in Serbia: a multicenter study

European journal of pediatrics, 2018-08, Vol.177 (8), p.1155-1162

2018

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First report on the nationwide prevalence of paediatric type 1 diabetes in Serbia and temporal trends of diabetes ketoacidosis at diagnosis—a multicentre study

Journal of Pediatric Endocrinology and Metabolism, 2021-02, Vol.34 (2), p.225-229

2021

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Problems in diabetes managment in school setting in children and adolescents with type 1 diabetes in Serbia

Vojnosanitetski pregled, 2016-03, Vol.73 (3), p.273-276

2016

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Using data-independent, high-resolution mass spectrometry in protein biomarker research: Perspectives and clinical applications

Systematic proteome and proteostasis profiling in human Trisomy 21 fibroblast cells

Diagnostics and correction of batch effects in large‐scale proteomic studies: a tutorial

Precise Temporal Profiling of Signaling Complexes in Primary Cells Using SWATH Mass Spectrometry

A new class of protein biomarkers based on subcellular distribution: application to a mouse liver cancer model

Similarities and Differences of Blood N-Glycoproteins in Five Solid Carcinomas at Localized Clinical Stage Analyzed by SWATH-MS

Comparison of three detergent-free protein extraction protocols for white adipose tissue

STAT6 promotes bi-directional modulation of PKM2 in liver and adipose inflammatory cells in rosiglitazone-treated mice

Abstract 6482: Activity based protein profiling by SWATH/DIA-MS mode (ABPP-SWATH/DIA-MS) from OCT-embedded tissues biopsies reveals lung tumor-specific protease profiles

Abstract 4934: Modified SWATH MS analysis of serine hydrolase activity in lung adenocarcinoma

Cadmium acute exposure induces metabolic and transcriptomic perturbations in human mature adipocytes

Arsenic induces metabolome remodeling in mature human adipocytes

Blood proteome of acute intracranial hemorrhage in infant victims of abusive head trauma

SMYD3: a new regulator of adipocyte precursor proliferation at the early steps of differentiation

Global and precise identification of functional miRNA targets in mESCs by integrative analysis

Abstract 5302: Unmasking aggressive tumor profiles in lung adenocarcinomas through the molecular abundances and catalytic action of serine hydrolases

Comparison of fractionation strategies for offline two-dimensional liquid chromatography tandem mass spectrometry analysis of proteins from mouse adipose tissue

Abstract 1887: Discrimination of aggressive tumor profiles in lung adenocarcinomas using activity based protein profiling by SWATH/DIA-MS mode

The CUL4B‐based E3 ubiquitin ligase regulates mitosis and brain development by recruiting phospho‐specific DCAFs

Proteomic Profiling of Advanced Melanoma Patients to Predict Therapeutic Response to Anti-PD-1 Therapy

Differential Proteomic Analysis of STAT6 Knockout Mice Reveals New Regulatory Function in Liver Lipid Homeostasis

Exploration des métabolites circulants chez les enfants ayant subi un traumatisme crânien abusif

First report on the nationwide incidence of type 1 diabetes and ketoacidosis at onset in children in Serbia: a multicenter study

First report on the nationwide prevalence of paediatric type 1 diabetes in Serbia and temporal trends of diabetes ketoacidosis at diagnosis—a multicentre study

Problems in diabetes managment in school setting in children and adolescents with type 1 diabetes in Serbia

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