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SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response

iScience, 2022-01, Vol.25 (1), p.103562, Article 103562

2022

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Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae

Nature (London), 2012-09, Vol.489 (7417), p.585-589

2012

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Identifying functional modules in the physical interactome of Saccharomyces cerevisiae

Proteomics (Weinheim), 2007-03, Vol.7 (6), p.944-960

2007

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Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation

Epigenetics & chromatin, 2023-04, Vol.16 (1), p.10-10, Article 10

2023

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Challenges and Rewards of Interaction Proteomics

Molecular & cellular proteomics, 2009-01, Vol.8 (1), p.3-18

2009

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Human-Chromatin-Related Protein Interactions Identify a Demethylase Complex Required for Chromosome Segregation

Cell reports (Cambridge), 2014-07, Vol.8 (1), p.297-310

2014

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Recruitment of the m6A/m6Am demethylase FTO to target RNAs by the telomeric zinc finger protein ZBTB48

Genome biology, 2024-09, Vol.25 (1), p.246-34, Article 246

2024

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Phenotypic switching induced by damaged matrix is associated with DNA methyltransferase 3A (DNMT3A) activity and nuclear localization in smooth muscle cells (SMC)

PloS one, 2013-08, Vol.8 (8), p.e69089

2013

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Brain abnormalities in patients with Beckwith-Wiedemann syndrome

American journal of medical genetics. Part A, 2012-06, Vol.158A (6), p.1388-1394

2012

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Local coherence in genetic interaction patterns reveals prevalent functional versatility

Bioinformatics, 2008-10, Vol.24 (20), p.2376-2383

2008

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Finding Maximum Edge Bicliques in Convex Bipartite Graphs

Algorithmica, 2012-10, Vol.64 (2), p.311-325

2012

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Up-to-date catalogues of yeast protein complexes

Nucleic acids research, 2009-02, Vol.37 (3), p.825-831

2009

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GenePro: a cytoscape plug-in for advanced visualization and analysis of interaction networks

Bioinformatics, 2006-09, Vol.22 (17), p.2178-2179

2006

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OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms

Bioinformatics, 2011-03, Vol.27 (6), p.883-884

2011

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The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses

Proteins, structure, function, and bioinformatics, 2010-07, Vol.78 (9), p.2075-2089

2010

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Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human

PloS one, 2010-11, Vol.5 (11), p.e14122-e14122

2010

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Protein–protein interaction networks: the puzzling riches

Current opinion in structural biology, 2013-12, Vol.23 (6), p.941-953

2013

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Assessment of methylation level prediction accuracy in methyl-DNA immunoprecipitation and sodium bisulfite based microarray platforms

Epigenetics, 2011-04, Vol.6 (4), p.410-415

2011

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Orexins, a novel family of hypothalamic neuropeptides, modulate pituitary luteinizing hormone secretion in an ovarian steroid-dependent manner

Regulatory peptides, 1998-11, Vol.78 (1-3), p.133-136

1998

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Omicron Spike Protein is Vulnerable to Reduction

Journal of molecular biology, 2023-07, Vol.435 (13), p.168128-168128, Article 168128

2023

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Regulation of alternative polyadenylation by the C2H2-zinc-finger protein Sp1

Molecular cell, 2022-09, Vol.82 (17), p.3135-3150.e9

2022

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C2H2-zinc-finger transcription factors bind RNA and function in diverse post-transcriptional regulatory processes

Molecular cell, 2024-10, Vol.84 (19), p.3810-3825.e10

2024

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Functional characterization of RebL1 highlights the evolutionary conservation of oncogenic activities of the RBBP4/7 orthologue in Tetrahymena thermophila

Nucleic acids research, 2021-06, Vol.49 (11), p.6196-6212

2021

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Identifying human pre-mRNA cleavage and polyadenylation factors by genome-wide CRISPR screens using a dual fluorescence readthrough reporter

Nucleic acids research, 2024-05, Vol.52 (8), p.4483-4501

2024

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SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response

Interaction landscape of membrane-protein complexes in Saccharomyces cerevisiae

Identifying functional modules in the physical interactome of Saccharomyces cerevisiae

Multilevel interrogation of H3.3 reveals a primordial role in transcription regulation

Challenges and Rewards of Interaction Proteomics

Human-Chromatin-Related Protein Interactions Identify a Demethylase Complex Required for Chromosome Segregation

Recruitment of the m6A/m6Am demethylase FTO to target RNAs by the telomeric zinc finger protein ZBTB48

Phenotypic switching induced by damaged matrix is associated with DNA methyltransferase 3A (DNMT3A) activity and nuclear localization in smooth muscle cells (SMC)

Survival-based CRISPR genetic screens across a panel of permissive cell lines identify common and cell-specific SARS-CoV-2 host factors

Brain abnormalities in patients with Beckwith-Wiedemann syndrome

Local coherence in genetic interaction patterns reveals prevalent functional versatility

Finding Maximum Edge Bicliques in Convex Bipartite Graphs

Up-to-date catalogues of yeast protein complexes

GenePro: a cytoscape plug-in for advanced visualization and analysis of interaction networks

OrthoNets: simultaneous visual analysis of orthologs and their interaction neighborhoods across different organisms

The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses

Expanding the landscape of chromatin modification (CM)-related functional domains and genes in human

Protein–protein interaction networks: the puzzling riches

Assessment of methylation level prediction accuracy in methyl-DNA immunoprecipitation and sodium bisulfite based microarray platforms

Orexins, a novel family of hypothalamic neuropeptides, modulate pituitary luteinizing hormone secretion in an ovarian steroid-dependent manner

Omicron Spike Protein is Vulnerable to Reduction

Regulation of alternative polyadenylation by the C2H2-zinc-finger protein Sp1

C2H2-zinc-finger transcription factors bind RNA and function in diverse post-transcriptional regulatory processes

Functional characterization of RebL1 highlights the evolutionary conservation of oncogenic activities of the RBBP4/7 orthologue in Tetrahymena thermophila

Identifying human pre-mRNA cleavage and polyadenylation factors by genome-wide CRISPR screens using a dual fluorescence readthrough reporter

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