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Upstream reciprocity and the evolution of gratitude

Proceedings of the Royal Society. B, Biological sciences, 2007-03, Vol.274 (1610), p.605-610

2007

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Expanding the Class of Global Objective Functions for Dissimilarity-Based Hierarchical Clustering

Journal of classification, 2023-11, Vol.40 (3), p.513-526

Roch, Sebastien

2023

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Modern Discrete Probability: An Essential Toolkit

Roch, Sébastien

2023

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On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods

Systematic biology, 2015-07, Vol.64 (4), p.663-676

2015

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Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model

Bulletin of mathematical biology, 2024, Vol.86 (9), p.106, Article 106

2024

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Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss

Journal of computational biology, 2021-05, Vol.28 (5), p.452-468

2021

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SUBMODULARITY OF INFLUENCE IN SOCIAL NETWORKS: FROM LOCAL TO GLOBAL

SIAM journal on computing, 2010-01, Vol.39 (6), p.2176-2188

2010

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A stochastic Farris transform for genetic data under the multispecies coalescent with applications to data requirements

Journal of mathematical biology, 2022-04, Vol.84 (5), p.36-36, Article 36

2022

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Evolutionary trees and the Ising model on the Bethe lattice: a proof of Steel’s conjecture

Probability theory and related fields, 2011-02, Vol.149 (1-2), p.149-189

2011

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A smoothing heuristic for a bilevel pricing problem

European journal of operational research, 2006-11, Vol.174 (3), p.1396-1413

2006

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Statistically consistent and computationally efficient inference of ancestral DNA sequences in the TKF91 model under dense taxon sampling

Bulletin of mathematical biology, 2020-01, Vol.82 (2), p.21, Article 21

2020

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Impossibility of Consistent Distance Estimation from Sequence Lengths Under the TKF91 Model

Bulletin of mathematical biology, 2020-09, Vol.82 (9), p.123-123, Article 123

2020

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Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent

Theoretical population biology, 2015-03, Vol.100, p.56-62

2015

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Robust Estimation of Latent Tree Graphical Models: Inferring Hidden States With Inexact Parameters

IEEE transactions on information theory, 2013-07, Vol.59 (7), p.4357-4373

2013

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Learning Nonsingular Phylogenies and Hidden Markov Models

The Annals of applied probability, 2006-05, Vol.16 (2), p.583-614

2006

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Learning nonsingular phylogenies and hidden Markov models

Annual ACM Symposium on Theory of Computing: Proceedings of the thirty-seventh annual ACM symposium on Theory of computing; 22-24 May 2005, 2005, p.366-375

2005

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Pairwise sequence alignment at arbitrarily large evolutionary distance

The Annals of applied probability, 2024-06, Vol.34 (3), p.2714

2024

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On the Inference of Large Phylogenies with Long Branches: How Long Is Too Long?

Bulletin of mathematical biology, 2011-07, Vol.73 (7), p.1627-1644

2011

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Inconsistency of Triplet-Based and Quartet-Based Species Tree Estimation under Intralocus Recombination

Journal of computational biology, 2022-11, Vol.29 (11), p.1173-1197

2022

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Network delay inference from additive metrics

Random structures & algorithms, 2010-09, Vol.37 (2), p.176-203

2010

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Long-Branch Attraction in Species Tree Estimation: Inconsistency of Partitioned Likelihood and Topology-Based Summary Methods

Systematic biology, 2019-03, Vol.68 (2), p.281-297

2019

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Toward Extracting All Phylogenetic Information from Matrices of Evolutionary Distances

Science (American Association for the Advancement of Science), 2010-03, Vol.327 (5971), p.1376-1379

Roch, Sebastien

2010

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Statistically Consistent Rooting of Species Trees Under the Multispecies Coalescent Model

Research in Computational Molecular Biology, p.41-57

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On learning thresholds of parities and unions of rectangles in random walk models

Random structures & algorithms, 2007-12, Vol.31 (4), p.406-417

Roch, Sébastien

2007

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Generalized least squares can overcome the critical threshold in respondent-driven sampling

Proceedings of the National Academy of Sciences - PNAS, 2018-10, Vol.115 (41), p.10299-10304

2018

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Upstream reciprocity and the evolution of gratitude

Expanding the Class of Global Objective Functions for Dissimilarity-Based Hierarchical Clustering

Modern Discrete Probability: An Essential Toolkit

On the Robustness to Gene Tree Estimation Error (or lack thereof) of Coalescent-Based Species Tree Methods

Maximum Likelihood Estimation for Unrooted 3-Leaf Trees: An Analytic Solution for the CFN Model

Polynomial-Time Statistical Estimation of Species Trees Under Gene Duplication and Loss

SUBMODULARITY OF INFLUENCE IN SOCIAL NETWORKS: FROM LOCAL TO GLOBAL

A stochastic Farris transform for genetic data under the multispecies coalescent with applications to data requirements

Evolutionary trees and the Ising model on the Bethe lattice: a proof of Steel’s conjecture

A smoothing heuristic for a bilevel pricing problem

Statistically consistent and computationally efficient inference of ancestral DNA sequences in the TKF91 model under dense taxon sampling

Impossibility of Consistent Distance Estimation from Sequence Lengths Under the TKF91 Model

Likelihood-based tree reconstruction on a concatenation of aligned sequence data sets can be statistically inconsistent

Robust Estimation of Latent Tree Graphical Models: Inferring Hidden States With Inexact Parameters

Learning Nonsingular Phylogenies and Hidden Markov Models

Learning nonsingular phylogenies and hidden Markov models

Pairwise sequence alignment at arbitrarily large evolutionary distance

On the Inference of Large Phylogenies with Long Branches: How Long Is Too Long?

Inconsistency of Triplet-Based and Quartet-Based Species Tree Estimation under Intralocus Recombination

Network delay inference from additive metrics

Long-Branch Attraction in Species Tree Estimation: Inconsistency of Partitioned Likelihood and Topology-Based Summary Methods

Toward Extracting All Phylogenetic Information from Matrices of Evolutionary Distances

Statistically Consistent Rooting of Species Trees Under the Multispecies Coalescent Model

On learning thresholds of parities and unions of rectangles in random walk models

Generalized least squares can overcome the critical threshold in respondent-driven sampling

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