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Whole Genome-Based Characterization of Listeria monocytogenes Isolates Recovered From the Food Chain in South Africa

Frontiers in microbiology, 2021-07, Vol.12, p.669287-669287

2021

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Resistance Sniffer: An online tool for prediction of drug resistance patterns of Mycobacterium tuberculosis isolates using next generation sequencing data

International journal of medical microbiology, 2020-02, Vol.310 (2), p.151399-151399, Article 151399

2020

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Assembling metagenomes, one community at a time

BMC genomics, 2017-07, Vol.18 (1), p.521-521, Article 521

2017

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Universal Lineage-Independent Markers of Multidrug Resistance in Mycobacterium tuberculosis

Microorganisms (Basel), 2024-06, Vol.12 (7), p.1340

2024

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Functional metagenomics unveils a multifunctional glycosyl hydrolase from the family 43 catalysing the breakdown of plant polymers in the calf rumen

PloS one, 2012-06, Vol.7 (6), p.e38134

2012

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Mupirocin Promotes Wound Healing by Stimulating Growth Factor Production and Proliferation of Human Keratinocytes

Frontiers in pharmacology, 2022-04, Vol.13, p.862112-862112

2022

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Selection of marker genes for genetic barcoding of microorganisms and binning of metagenomic reads by Barcoder software tools

BMC bioinformatics, 2018-08, Vol.19 (1), p.309-309, Article 309

2018

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The Epistatic Landscape of Antibiotic Resistance of Different Clades of Mycobacterium tuberculosis

Antibiotics (Basel), 2021-07, Vol.10 (7), p.857

2021

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Interplay of intracellular and trans‐cellular DNA methylation in natural archaeal consortia

Environmental microbiology reports, 2024-04, Vol.16 (2), p.e13258-n/a

2024

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Genetic, Epigenetic and Phenotypic Diversity of Four Bacillus velezensis Strains Used for Plant Protection or as Probiotics

Frontiers in microbiology, 2019-11, Vol.10, p.2610-2610

2019

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Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42

Nature biotechnology, 2007-09, Vol.25 (9), p.1007-1014

2007

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Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011

PloS one, 2011-10, Vol.6 (10), p.e25702

2011

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Virulence and antimicrobial resistance genes are enriched in the plasmidome of clinical Escherichia coli isolates compared with wastewater isolates from western Kenya

Infection, genetics and evolution, 2021-07, Vol.91, p.104784-104784, Article 104784

2021

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The Effect of Iodine-Containing Nano-Micelles, FS-1, on Antibiotic Resistance, Gene Expression and Epigenetic Modifications in the Genome of Multidrug Resistant MRSA Strain Staphylococcus aureus ATCC BAA-39

Frontiers in microbiology, 2020-10, Vol.11, p.581660-581660

2020

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EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

BMC genomics, 2018-05, Vol.19 (1), p.323-323, Article 323

2018

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Think big - giant genes in bacteria

Environmental microbiology, 2008-03, Vol.10 (3), p.768-777

2008

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Complete genome sequence and epigenetic profile of Bacillus velezensis UCMB5140 used for plant and crop protection in comparison with other plant-associated Bacillus strains

Applied microbiology and biotechnology, 2020-09, Vol.104 (17), p.7643-7656

2020

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Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species

BMC genomics, 2014-09, Vol.15 (1), p.813

2014

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SWPhylo – A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome-Based and Gene-Based Phylogenetic Trees

Evolutionary bioinformatics online, 2018, Vol.14, p.1176934318759299-1176934318759299

2018

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Functional diversity of nanohaloarchaea within xylan-degrading consortia

Frontiers in microbiology, 2023-05, Vol.14, p.1182464

2023

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Gene expression regulation in the plant growth promoting Bacillus atrophaeus UCMB-5137 stimulated by maize root exudates

Gene, 2016-09, Vol.590 (1), p.18-28

2016

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Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats

Environmental microbiology, 2015-02, Vol.17 (2), p.332-345

2015

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Whole genome sequencing and genotyping Klebsiella pneumoniae multi-drug resistant hospital isolates from Western Kenya

Access microbiology, 2024, Vol.6 (1)

2024

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Analysis of Whole-Genome Sequences of Pathogenic Gram-Positive and Gram-Negative Isolates from the Same Hospital Environment to Investigate Common Evolutionary Trends Associated with Horizontal Gene Exchange, Mutations and DNA Methylation Patterning

Microorganisms (Basel), 2023-01, Vol.11 (2), p.323

2023

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Whole Genome-Based Characterization of Listeria monocytogenes Isolates Recovered From the Food Chain in South Africa

Resistance Sniffer: An online tool for prediction of drug resistance patterns of Mycobacterium tuberculosis isolates using next generation sequencing data

Assembling metagenomes, one community at a time

Universal Lineage-Independent Markers of Multidrug Resistance in Mycobacterium tuberculosis

Functional metagenomics unveils a multifunctional glycosyl hydrolase from the family 43 catalysing the breakdown of plant polymers in the calf rumen

Mupirocin Promotes Wound Healing by Stimulating Growth Factor Production and Proliferation of Human Keratinocytes

Selection of marker genes for genetic barcoding of microorganisms and binning of metagenomic reads by Barcoder software tools

The Epistatic Landscape of Antibiotic Resistance of Different Clades of Mycobacterium tuberculosis

Interplay of intracellular and trans‐cellular DNA methylation in natural archaeal consortia

Genetic, Epigenetic and Phenotypic Diversity of Four Bacillus velezensis Strains Used for Plant Protection or as Probiotics

Comparative analysis of the complete genome sequence of the plant growth-promoting bacterium Bacillus amyloliquefaciens FZB42

Mainstreams of horizontal gene exchange in enterobacteria: consideration of the outbreak of enterohemorrhagic E. coli O104:H4 in Germany in 2011

Virulence and antimicrobial resistance genes are enriched in the plasmidome of clinical Escherichia coli isolates compared with wastewater isolates from western Kenya

Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica

The Effect of Iodine-Containing Nano-Micelles, FS-1, on Antibiotic Resistance, Gene Expression and Epigenetic Modifications in the Genome of Multidrug Resistant MRSA Strain Staphylococcus aureus ATCC BAA-39

EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes

Think big - giant genes in bacteria

Complete genome sequence and epigenetic profile of Bacillus velezensis UCMB5140 used for plant and crop protection in comparison with other plant-associated Bacillus strains

Analysis of genomic rearrangements, horizontal gene transfer and role of plasmids in the evolution of industrial important Thermus species

SWPhylo – A Novel Tool for Phylogenomic Inferences by Comparison of Oligonucleotide Patterns and Integration of Genome-Based and Gene-Based Phylogenetic Trees

Functional diversity of nanohaloarchaea within xylan-degrading consortia

Gene expression regulation in the plant growth promoting Bacillus atrophaeus UCMB-5137 stimulated by maize root exudates

Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats

Whole genome sequencing and genotyping Klebsiella pneumoniae multi-drug resistant hospital isolates from Western Kenya

Analysis of Whole-Genome Sequences of Pathogenic Gram-Positive and Gram-Negative Isolates from the Same Hospital Environment to Investigate Common Evolutionary Trends Associated with Horizontal Gene Exchange, Mutations and DNA Methylation Patterning

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