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Gene Sets Net Correlations Analysis (GSNCA): a multivariate differential coexpression test for gene sets

Bioinformatics, 2014-02, Vol.30 (3), p.360-368

2014

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Common gene expression patterns are observed in rice roots during associations with plant growth-promoting bacteria, Herbaspirillum seropedicae and Azospirillum brasilense

Scientific reports, 2022-05, Vol.12 (1), p.8827-8827, Article 8827

2022

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The plant growth-promoting bacteria, Azospirillum brasilense, induce a diverse array of genes in rice shoots and promote their growth

Plant growth regulation, 2022-05, Vol.97 (1), p.143-155

2022

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RNA-seq reveals differentially expressed genes in rice (Oryza sativa) roots during interactions with plant-growth promoting bacteria, Azospirillum brasilense

PloS one, 2019-05, Vol.14 (5), p.e0217309-e0217309

2019

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Peak-To-Average Power Ratio Reduction in OFDM Systems: A Survey And Taxonomy

IEEE Communications surveys and tutorials, 2013-01, Vol.15 (4), p.1567-1592

2013

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A machine learning method to process voice samples for identification of Parkinson’s disease

Scientific reports, 2023-11, Vol.13 (1), p.20615-20615, Article 20615

2023

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Differential network analysis and protein-protein interaction study reveals active protein modules in glucocorticoid resistance for infant acute lymphoblastic leukemia

Molecular medicine (Cambridge, Mass.), 2019-08, Vol.25 (1), p.36-12, Article 36

2019

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Proteome-transcriptome alignment of molecular portraits achieved by self-contained gene set analysis: Consensus colon cancer subtypes case study

PloS one, 2019-08, Vol.14 (8), p.e0221444

2019

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Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats

PloS one, 2019-01, Vol.14 (1), p.e0199274

2019

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RNA-Seq Analysis of Spinal Cord Tissues from hPFN1G118V Transgenic Mouse Model of ALS at Pre-symptomatic and End-Stages of Disease

Scientific reports, 2018-09, Vol.8 (1), p.1-12, Article 13737

2018

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16S rRNA Gene-Based Metagenomic Analysis of Rhizosphere Soil Bacteria in Arkansas Rice Crop Fields

Agronomy (Basel), 2022-01, Vol.12 (1), p.222

2022

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Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model

Nutrients, 2021-10, Vol.13 (11), p.3718

2021

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Resistant starch slows the progression of CKD in the 5/6 nephrectomy mouse model

Physiological reports, 2020-10, Vol.8 (19), p.e14610-n/a

2020

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Azospirillum brasilense improves rice growth under salt stress by regulating the expression of key genes involved in salt stress response, abscisic acid signaling, and nutrient transport, among others

Frontiers in agronomy, 2023, Vol.5

2023

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Evasion of regulatory phosphorylation by an alternatively spliced isoform of Musashi2

Scientific reports, 2017-09, Vol.7 (1), p.11503-17, Article 11503

2017

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16S rRNA Gene-Based Metagenomic Analysis of Ozark Cave Bacteria

Diversity (Basel), 2017-09, Vol.9 (3), p.31

2017

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Network-based expression analysis reveals key genes related to glucocorticoid resistance in infant acute lymphoblastic leukemia

Cellular oncology (Dordrecht), 2017-02, Vol.40 (1), p.33-45

2017

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Platform-independent gene expression signature differentiates sessile serrated adenomas/polyps and hyperplastic polyps of the colon

BMC medical genomics, 2017-12, Vol.10 (1), p.81-81, Article 81

2017

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Gene set analysis approaches for RNA-seq data: performance evaluation and application guideline

Briefings in bioinformatics, 2016-05, Vol.17 (3), p.393-407

2016

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Investigating the transcriptomic responses in rice roots during interactions with plant growth‐promoting bacteria, Burkholderia unamae

The FASEB journal, 2022-05, Vol.36 (S1), p.n/a

2022

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Higher Glycolysis in Circulating Leukocytes in Patients with CKD: SA-PO1146

Journal of the American Society of Nephrology, 2024-10, Vol.35 (10S)

2024

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GSAR: Bioconductor package for Gene Set analysis in R

BMC bioinformatics, 2017-01, Vol.18 (1), p.61-61, Article 61

2017

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Comparative evaluation of gene set analysis approaches for RNA-Seq data

BMC bioinformatics, 2014-12, Vol.15 (1), p.397-397, Article 397

2014

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Bit-Error-Rate Performance of Companding Transforms for OFDM

IEEE transactions on vehicular technology, 2013-10, Vol.62 (8), p.4116-4120

2013

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FRI291 Musashi1 And Musashi2 Mark Distinct Pituitary Stem Cell Populations

Journal of the Endocrine Society, 2023-10, Vol.7 (Supplement_1)

2023

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Gene Sets Net Correlations Analysis (GSNCA): a multivariate differential coexpression test for gene sets

Common gene expression patterns are observed in rice roots during associations with plant growth-promoting bacteria, Herbaspirillum seropedicae and Azospirillum brasilense

The plant growth-promoting bacteria, Azospirillum brasilense, induce a diverse array of genes in rice shoots and promote their growth

RNA-seq reveals differentially expressed genes in rice (Oryza sativa) roots during interactions with plant-growth promoting bacteria, Azospirillum brasilense

Peak-To-Average Power Ratio Reduction in OFDM Systems: A Survey And Taxonomy

A machine learning method to process voice samples for identification of Parkinson’s disease

Differential network analysis and protein-protein interaction study reveals active protein modules in glucocorticoid resistance for infant acute lymphoblastic leukemia

Proteome-transcriptome alignment of molecular portraits achieved by self-contained gene set analysis: Consensus colon cancer subtypes case study

Metaproteomics reveals potential mechanisms by which dietary resistant starch supplementation attenuates chronic kidney disease progression in rats

RNA-Seq Analysis of Spinal Cord Tissues from hPFN1G118V Transgenic Mouse Model of ALS at Pre-symptomatic and End-Stages of Disease

16S rRNA Gene-Based Metagenomic Analysis of Rhizosphere Soil Bacteria in Arkansas Rice Crop Fields

Milk Formula Diet Alters Bacterial and Host Protein Profile in Comparison to Human Milk Diet in Neonatal Piglet Model

Resistant starch slows the progression of CKD in the 5/6 nephrectomy mouse model

Azospirillum brasilense improves rice growth under salt stress by regulating the expression of key genes involved in salt stress response, abscisic acid signaling, and nutrient transport, among others

Evasion of regulatory phosphorylation by an alternatively spliced isoform of Musashi2

16S rRNA Gene-Based Metagenomic Analysis of Ozark Cave Bacteria

Network-based expression analysis reveals key genes related to glucocorticoid resistance in infant acute lymphoblastic leukemia

Platform-independent gene expression signature differentiates sessile serrated adenomas/polyps and hyperplastic polyps of the colon

Gene set analysis approaches for RNA-seq data: performance evaluation and application guideline

Investigating the transcriptomic responses in rice roots during interactions with plant growth‐promoting bacteria, Burkholderia unamae

Higher Glycolysis in Circulating Leukocytes in Patients with CKD: SA-PO1146

GSAR: Bioconductor package for Gene Set analysis in R

Comparative evaluation of gene set analysis approaches for RNA-Seq data

Bit-Error-Rate Performance of Companding Transforms for OFDM

FRI291 Musashi1 And Musashi2 Mark Distinct Pituitary Stem Cell Populations

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