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Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics

Nature communications, 2023-07, Vol.14 (1), p.4046-4046, Article 4046

2023

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DeepIso: A Deep Learning Model for Peptide Feature Detection from LC-MS map

Scientific reports, 2019-11, Vol.9 (1), p.17168-13, Article 17168

2019

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B cell-intrinsic TLR7 signaling is essential for the development of spontaneous germinal centers

The Journal of immunology (1950), 2014-11, Vol.193 (9), p.4400-4414

2014

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Acute febrile illness among outpatients seeking health care in Bangladeshi hospitals prior to the COVID-19 pandemic

PloS one, 2022-09, Vol.17 (9), p.e0273902-e0273902

2022

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Author Correction: Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics

Nature communications, 2024-01, Vol.15 (1), p.701-701, Article 701

2024

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Deep neural network for detecting arbitrary precision peptide features through attention based segmentation

Scientific reports, 2021-09, Vol.11 (1), p.18249-18249, Article 18249

2021

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A systemic macrophage response is required to contain a peripheral poxvirus infection

PLoS pathogens, 2017-06, Vol.13 (6), p.e1006435-e1006435

2017

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Impaired apoptotic cell clearance in the germinal center by Mer-deficient tingible body macrophages leads to enhanced antibody-forming cell and germinal center responses

The Journal of immunology (1950), 2010-11, Vol.185 (10), p.5859-5868

2010

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Orai3 and Orai1 mediate CRAC channel function and metabolic reprogramming in B cells

eLife, 2023-02, Vol.12

2023

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B cell-intrinsic CD84 and Ly108 maintain germinal center B cell tolerance

The Journal of immunology (1950), 2015-05, Vol.194 (9), p.4130-4143

2015

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Dynamics of Japanese encephalitis virus transmission among pigs in Northwest Bangladesh and the potential impact of pig vaccination

PLoS neglected tropical diseases, 2014-09, Vol.8 (9), p.e3166

2014

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miRNA-Mediated Control of B Cell Responses in Immunity and SLE

Frontiers in immunology, 2021-05, Vol.12, p.683710-683710

2021

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Prolonged apoptotic cell accumulation in germinal centers of Mer-deficient mice causes elevated B cell and CD4+ Th cell responses leading to autoantibody production

The Journal of immunology (1950), 2013-02, Vol.190 (4), p.1433-1446

2013

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Women's Perception of Male Involvement in Antenatal, Childbirth and Postnatal Care in Urban Slum Areas in Bangladesh: A Community-Based Cross-Sectional Study

Healthcare (Basel), 2021-04, Vol.9 (4), p.473

2021

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Impaired clearance of apoptotic cells in germinal centers: implications for loss of B cell tolerance and induction of autoimmunity

Immunologic research, 2011-12, Vol.51 (2-3), p.125-133

Rahman, Ziaur S. M.

2011

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The lupus-prone NZM2410/NZW strain-derived Sle1b sublocus alters the germinal center checkpoint in female mice in a B cell-intrinsic manner

The Journal of immunology (1950), 2012-12, Vol.189 (12), p.5667-5681

2012

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Hydroclimatological variability and dengue transmission in Dhaka, Bangladesh: a time-series study

BMC infectious diseases, 2012-04, Vol.12 (1), p.98-98, Article 98

2012

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Spontaneous germinal centers and autoimmunity

Autoimmunity (Chur, Switzerland), 2017-02, Vol.50 (1), p.4-18

2017

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Regulation of B Cell Responses in SLE by Three Classes of Interferons

International journal of molecular sciences, 2021-10, Vol.22 (19), p.10464

2021

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Complete De Novo Assembly of Monoclonal Antibody Sequences

Scientific reports, 2016-08, Vol.6 (1), p.31730-31730, Article 31730

2016

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The Lupus Susceptibility Locus Sle1 Breaches Peripheral B Cell Tolerance at the Antibody-Forming Cell and Germinal Center Checkpoints

The Journal of immunology (1950), 2009-11, Vol.183 (9), p.5716-5727

2009

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The Post-GWAS Era: How to Validate the Contribution of Gene Variants in Lupus

Current rheumatology reports, 2019-01, Vol.21 (1), p.3-3, Article 3

2019

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The Fas-Associated Death Domain Protein Is Required in Apoptosis and TLR-Induced Proliferative Responses in B Cells

Journal of Immunology, 2006-06, Vol.176 (11), p.6852-6861

2006

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The interplay of type I and type II interferons in murine autoimmune cholangitis as a basis for sex‐biased autoimmunity

Hepatology (Baltimore, Md.), 2018-04, Vol.67 (4), p.1408-1419

2018

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TLR7 Negatively Regulates B10 Cells Predominantly in an IFNγ Signaling Dependent Manner

Frontiers in immunology, 2020-07, Vol.11, p.1632-1632

2020

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Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics

DeepIso: A Deep Learning Model for Peptide Feature Detection from LC-MS map

B cell-intrinsic TLR7 signaling is essential for the development of spontaneous germinal centers

Acute febrile illness among outpatients seeking health care in Bangladeshi hospitals prior to the COVID-19 pandemic

Author Correction: Glycopeptide database search and de novo sequencing with PEAKS GlycanFinder enable highly sensitive glycoproteomics

Deep neural network for detecting arbitrary precision peptide features through attention based segmentation

A systemic macrophage response is required to contain a peripheral poxvirus infection

Impaired apoptotic cell clearance in the germinal center by Mer-deficient tingible body macrophages leads to enhanced antibody-forming cell and germinal center responses

Orai3 and Orai1 mediate CRAC channel function and metabolic reprogramming in B cells

B cell-intrinsic CD84 and Ly108 maintain germinal center B cell tolerance

Dynamics of Japanese encephalitis virus transmission among pigs in Northwest Bangladesh and the potential impact of pig vaccination

miRNA-Mediated Control of B Cell Responses in Immunity and SLE

Prolonged apoptotic cell accumulation in germinal centers of Mer-deficient mice causes elevated B cell and CD4+ Th cell responses leading to autoantibody production

Women's Perception of Male Involvement in Antenatal, Childbirth and Postnatal Care in Urban Slum Areas in Bangladesh: A Community-Based Cross-Sectional Study

Impaired clearance of apoptotic cells in germinal centers: implications for loss of B cell tolerance and induction of autoimmunity

The lupus-prone NZM2410/NZW strain-derived Sle1b sublocus alters the germinal center checkpoint in female mice in a B cell-intrinsic manner

Hydroclimatological variability and dengue transmission in Dhaka, Bangladesh: a time-series study

Spontaneous germinal centers and autoimmunity

Regulation of B Cell Responses in SLE by Three Classes of Interferons

Complete De Novo Assembly of Monoclonal Antibody Sequences

The Lupus Susceptibility Locus Sle1 Breaches Peripheral B Cell Tolerance at the Antibody-Forming Cell and Germinal Center Checkpoints

The Post-GWAS Era: How to Validate the Contribution of Gene Variants in Lupus

The Fas-Associated Death Domain Protein Is Required in Apoptosis and TLR-Induced Proliferative Responses in B Cells

The interplay of type I and type II interferons in murine autoimmune cholangitis as a basis for sex‐biased autoimmunity

TLR7 Negatively Regulates B10 Cells Predominantly in an IFNγ Signaling Dependent Manner

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