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What is principal component analysis?

Nature biotechnology, 2008-03, Vol.26 (3), p.303-304

RINGNER, Markus

2008

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GOBO: gene expression-based outcome for breast cancer online

PloS one, 2011-03, Vol.6 (3), p.e17911-e17911

2011

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The landscape of candidate driver genes differs between male and female breast cancer

PloS one, 2013-10, Vol.8 (10), p.e78299

2013

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Consensus of gene expression phenotypes and prognostic risk predictors in primary lung adenocarcinoma

Oncotarget, 2016-08, Vol.7 (33), p.52957-52973

2016

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High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma

Proceedings of the National Academy of Sciences - PNAS, 2008-09, Vol.105 (37), p.14094-14099

2008

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Making breast cancer molecular subtypes robust?

JNCI : Journal of the National Cancer Institute, 2015-01, Vol.107 (1), p.386-dju386

2015

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Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

PLoS computational biology, 2005-12, Vol.1 (7), p.e72-e72

2005

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Prognostic and Chemotherapy Predictive Value of Gene-Expression Phenotypes in Primary Lung Adenocarcinoma

Clinical cancer research, 2016-01, Vol.22 (1), p.218-229

2016

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Gene expression profiling-based identification of molecular subtypes in stage IV melanomas with different clinical outcome

Clinical cancer research, 2010-07, Vol.16 (13), p.3356-3367

2010

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Molecular subtypes of breast cancer are associated with characteristic DNA methylation patterns

Breast cancer research : BCR, 2010-01, Vol.12 (3), p.R36-R36, Article R36

2010

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Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

PLoS computational biology, 2005, Vol.preprint (2005), p.e72

2005

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Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome

Clinical cancer research, 2014-12, Vol.20 (23), p.6127-6140

2014

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Prediction of Stage, Grade, and Survival in Bladder Cancer Using Genome Wide Expression Data: A Validation Study

Clinical cancer research, 2010-09, Vol.16 (17), p.4421-4433

2010

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Mutational and putative neoantigen load predict clinical benefit of adoptive T cell therapy in melanoma

Nature communications, 2017-11, Vol.8 (1), p.1738-1738, Article 1738

2017

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The CD44+/CD24- phenotype is enriched in basal-like breast tumors

Breast cancer research : BCR, 2008-01, Vol.10 (3), p.R53-R53, Article R53

2008

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Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing

Nature communications, 2018-12, Vol.9 (1), p.5150-13, Article 5150

2018

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Genomic and transcriptional alterations in lung adenocarcinoma in relation to smoking history

Clinical cancer research, 2014-09, Vol.20 (18), p.4912-4924

2014

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Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing

Cell research, 2021-05, Vol.31 (5), p.554-568

2021

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The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition

Breast cancer research : BCR, 2012-07, Vol.14 (4), p.R113-R113, Article R113

2012

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Exosomes reflect the hypoxic status of glioma cells and mediate hypoxia-dependent activation of vascular cells during tumor development

Proceedings of the National Academy of Sciences - PNAS, 2013-04, Vol.110 (18), p.7312-7317

2013

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Integrative epigenomic analysis of differential DNA methylation in urothelial carcinoma

Genome medicine, 2015-03, Vol.7 (1), p.23-23, Article 23

2015

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Genome-wide transcription factor binding site/promoter databases for the analysis of gene sets and co-occurrence of transcription factor binding motifs

BMC genomics, 2010-03, Vol.11 (1), p.145-145, Article 145

2010

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Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species

iScience, 2022-05, Vol.25 (5), p.104303, Article 104303

2022

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Microarray expression profiling in melanoma reveals a BRAF mutation signature

Oncogene, 2004-05, Vol.23 (23), p.4060-4067

2004

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DNA methylation and histone modifications regulate SOX11 expression in lymphoid and solid cancer cells

BMC cancer, 2015-04, Vol.15 (1), p.273-273, Article 273

2015

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What is principal component analysis?

GOBO: gene expression-based outcome for breast cancer online

The landscape of candidate driver genes differs between male and female breast cancer

Consensus of gene expression phenotypes and prognostic risk predictors in primary lung adenocarcinoma

High Myc pathway activity and low stage of neuronal differentiation associate with poor outcome in neuroblastoma

Making breast cancer molecular subtypes robust?

Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

Prognostic and Chemotherapy Predictive Value of Gene-Expression Phenotypes in Primary Lung Adenocarcinoma

Gene expression profiling-based identification of molecular subtypes in stage IV melanomas with different clinical outcome

Molecular subtypes of breast cancer are associated with characteristic DNA methylation patterns

Folding free energies of 5'-UTRs impact post-transcriptional regulation on a genomic scale in yeast

Genome-wide DNA methylation analysis of lung carcinoma reveals one neuroendocrine and four adenocarcinoma epitypes associated with patient outcome

Prediction of Stage, Grade, and Survival in Bladder Cancer Using Genome Wide Expression Data: A Validation Study

Mutational and putative neoantigen load predict clinical benefit of adoptive T cell therapy in melanoma

The CD44+/CD24- phenotype is enriched in basal-like breast tumors

Spatially and functionally distinct subclasses of breast cancer-associated fibroblasts revealed by single cell RNA sequencing

Genomic and transcriptional alterations in lung adenocarcinoma in relation to smoking history

Tissue-specific transcriptional imprinting and heterogeneity in human innate lymphoid cells revealed by full-length single-cell RNA-sequencing

The gene expression landscape of breast cancer is shaped by tumor protein p53 status and epithelial-mesenchymal transition

Exosomes reflect the hypoxic status of glioma cells and mediate hypoxia-dependent activation of vascular cells during tumor development

Integrative epigenomic analysis of differential DNA methylation in urothelial carcinoma

Genome-wide transcription factor binding site/promoter databases for the analysis of gene sets and co-occurrence of transcription factor binding motifs

Environmentally induced DNA methylation is inherited across generations in an aquatic keystone species

Microarray expression profiling in melanoma reveals a BRAF mutation signature

DNA methylation and histone modifications regulate SOX11 expression in lymphoid and solid cancer cells

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