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Review: microbial transformations of human bile acids

Microbiome, 2021-06, Vol.9 (1), p.1-140, Article 140

2021

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Illuminating the dark matter in metabolomics

Proceedings of the National Academy of Sciences - PNAS, 2015-10, Vol.112 (41), p.12549-12550

2015

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Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

Trends in pharmacological sciences (Regular ed.), 2017-02, Vol.38 (2), p.143-154

2017

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Learning representations of microbe-metabolite interactions

Nature methods, 2019-12, Vol.16 (12), p.1306-1314

2019

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Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

The ISME Journal, 2016-06, Vol.10 (6), p.1483-1498

2016

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Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung

mBio, 2014-03, Vol.5 (2), p.e00956-e00913

2014

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Untargeted Metabolomic Biomarker Discovery for the Detection of Ectopic Pregnancy

International journal of molecular sciences, 2024-10, Vol.25 (19), p.10333

2024

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Balance Trees Reveal Microbial Niche Differentiation

mSystems, 2017-01, Vol.2 (1)

2017

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Longitudinal microbial and molecular dynamics in the cystic fibrosis lung after Elexacaftor-Tezacaftor-Ivacaftor therapy

Respiratory research, 2023-12, Vol.24 (1), p.317-14, Article 317

2023

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Baat Gene Knockout Alters Post-Natal Development, the Gut Microbiome, and Reveals Unusual Bile Acids in Mice

Journal of lipid research, 2022-12, Vol.63 (12), p.100297, Article 100297

2022

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Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

Genome Biology, 2019-10, Vol.20 (1), p.226-226, Article 226

2019

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Streptozotocin-induced hyperglycemia alters the cecal metabolome and exacerbates antibiotic-induced dysbiosis

Cell reports (Cambridge), 2021-12, Vol.37 (11), p.110113-110113, Article 110113

2021

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Real-Time Metabolomics on Living Microorganisms Using Ambient Electrospray Ionization Flow-Probe

Analytical chemistry (Washington), 2013-08, Vol.85 (15), p.7014-7018

2013

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Neutrophilic proteolysis in the cystic fibrosis lung correlates with a pathogenic microbiome

Microbiome, 2019-02, Vol.7 (1), p.23-23, Article 23

2019

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Shifts in the functional capacity and metabolite composition of the gut microbiome during recovery from enteric infection

Frontiers in cellular and infection microbiology, 2024-05, Vol.14, p.1359576-1359576

2024

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Microbiome and metabolome patterns after lung transplantation reflect underlying disease and chronic lung allograft dysfunction

Microbiome, 2024-10, Vol.12 (1), p.196-12, Article 196

2024

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Decline of a distinct coral reef holobiont community under ocean acidification

Microbiome, 2024-04, Vol.12 (1), p.75-75, Article 75

2024

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A multi-omic trip through the human gut

Nature metabolism, 2023-05, Vol.5 (5), p.720-721

2023

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Formation and Properties of Stabilized Aluminum Nanoparticles

ACS applied materials & interfaces, 2009-03, Vol.1 (3), p.703-709

2009

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Cystic Fibrosis Rapid Response: Translating Multi-omics Data into Clinically Relevant Information

mBio, 2019-04, Vol.10 (2)

2019

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High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

mSystems, 2020-06, Vol.5 (3)

2020

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Ecological networking of cystic fibrosis lung infections

NPJ biofilms and microbiomes, 2016-12, Vol.2 (1), p.4-11, Article 4

2016

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Microbial Transformations of Organically Fermented Foods

Metabolites, 2019-08, Vol.9 (8), p.165

2019

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Microbiome-wide association studies link dynamic microbial consortia to disease

Nature (London), 2016-07, Vol.535 (7610), p.94-103

2016

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The Community Ecology of Microbial Molecules

Journal of chemical ecology, 2014-12, Vol.40 (11-12), p.1161-1162

2014

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Review: microbial transformations of human bile acids

Illuminating the dark matter in metabolomics

Molecular Networking As a Drug Discovery, Drug Metabolism, and Precision Medicine Strategy

Learning representations of microbe-metabolite interactions

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

Biogeochemical forces shape the composition and physiology of polymicrobial communities in the cystic fibrosis lung

Untargeted Metabolomic Biomarker Discovery for the Detection of Ectopic Pregnancy

Balance Trees Reveal Microbial Niche Differentiation

Longitudinal microbial and molecular dynamics in the cystic fibrosis lung after Elexacaftor-Tezacaftor-Ivacaftor therapy

Baat Gene Knockout Alters Post-Natal Development, the Gut Microbiome, and Reveals Unusual Bile Acids in Mice

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

Streptozotocin-induced hyperglycemia alters the cecal metabolome and exacerbates antibiotic-induced dysbiosis

Real-Time Metabolomics on Living Microorganisms Using Ambient Electrospray Ionization Flow-Probe

Neutrophilic proteolysis in the cystic fibrosis lung correlates with a pathogenic microbiome

Shifts in the functional capacity and metabolite composition of the gut microbiome during recovery from enteric infection

Microbiome and metabolome patterns after lung transplantation reflect underlying disease and chronic lung allograft dysfunction

Decline of a distinct coral reef holobiont community under ocean acidification

A multi-omic trip through the human gut

Formation and Properties of Stabilized Aluminum Nanoparticles

Cystic Fibrosis Rapid Response: Translating Multi-omics Data into Clinically Relevant Information

High-Resolution Longitudinal Dynamics of the Cystic Fibrosis Sputum Microbiome and Metabolome through Antibiotic Therapy

Ecological networking of cystic fibrosis lung infections

Microbial Transformations of Organically Fermented Foods

Microbiome-wide association studies link dynamic microbial consortia to disease

The Community Ecology of Microbial Molecules

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