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UALCAN: An update to the integrated cancer data analysis platform

Neoplasia (New York, N.Y.), 2022-03, Vol.25, p.18-27

2022

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Gene Density, Transcription, and Insulators Contribute to the Partition of the Drosophila Genome into Physical Domains

Molecular cell, 2012-11, Vol.48 (3), p.471-484

2012

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Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing

Molecular cell, 2015-04, Vol.58 (2), p.216-231

2015

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DIVAN: accurate identification of non-coding disease-specific risk variants using multi-omics profiles

Genome Biology, 2016-12, Vol.17 (1), p.252-252, Article 252

2016

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Targeting MLL1 H3K4 Methyltransferase Activity in Mixed-Lineage Leukemia

Molecular cell, 2014-01, Vol.53 (2), p.247-261

2014

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Therapeutic targeting of BET bromodomain proteins in castration-resistant prostate cancer

Nature (London), 2014-06, Vol.510 (7504), p.278-282

2014

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SAINT: probabilistic scoring of affinity purification-mass spectrometry data

Nature methods, 2011-01, Vol.8 (1), p.70

2011

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Characterization of the EZH2-MMSET Histone Methyltransferase Regulatory Axis in Cancer

Molecular cell, 2013-01, Vol.49 (1), p.80-93

2013

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Integrative characterization of G-Quadruplexes in the three-dimensional chromatin structure

Epigenetics, 2019-09, Vol.14 (9), p.894-911

2019

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Truncation of mutant huntingtin in knock-in mice demonstrates exon1 huntingtin is a key pathogenic form

Nature communications, 2020-05, Vol.11 (1), p.2582-15, Article 2582

2020

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An Integrated Network of Androgen Receptor, Polycomb, and TMPRSS2-ERG Gene Fusions in Prostate Cancer Progression

Cancer cell, 2010-05, Vol.17 (5), p.443-454

2010

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Systematic Evaluation of DNA Sequence Variations on in vivo Transcription Factor Binding Affinity

Frontiers in genetics, 2021-09, Vol.12, p.667866-667866

2021

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NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

Genome Biology, 2022-12, Vol.23 (1), p.270-270, Article 270

2022

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A machine learning approach to brain epigenetic analysis reveals kinases associated with Alzheimer's disease

Nature communications, 2021-07, Vol.12 (1), p.4472-12, Article 4472

2021

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Role of TET1-mediated epigenetic modulation in Alzheimer's disease

Neurobiology of disease, 2023-09, Vol.185, p.106257-106257, Article 106257

2023

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Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations

Nature communications, 2019-02, Vol.10 (1), p.880-880, Article 880

2019

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A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome

Nature communications, 2016-10, Vol.7 (1), p.12522-12522, Article 12522

2016

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A novel statistical method for quantitative comparison of multiple ChIP-seq datasets

Bioinformatics (Oxford, England), 2015-06, Vol.31 (12), p.1889-1896

2015

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Integrative Bayesian tensor regression for imaging genetics applications

Frontiers in neuroscience, 2023-08, Vol.17, p.1212218-1212218

2023

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p53-Mediated Activation of miRNA34 Candidate Tumor-Suppressor Genes

Current biology, 2007-08, Vol.17 (15), p.1298-1307

2007

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EWS/ETS-Driven Ewing Sarcoma Requires BET Bromodomain Proteins

Cancer research (Chicago, Ill.), 2018-08, Vol.78 (16), p.4760-4773

2018

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The central role of EED in the orchestration of polycomb group complexes

Nature communications, 2014-01, Vol.5 (1), p.3127-3127, Article 3127

2014

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Correction: Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC)

PloS one, 2024-08, Vol.19 (8), p.e0308819

2024

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Cooperation between Polycomb and androgen receptor during oncogenic transformation

Genome research, 2012-02, Vol.22 (2), p.322

2012

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FOXP3 Orchestrates H4K16 Acetylation and H3K4 Trimethylation for Activation of Multiple Genes by Recruiting MOF and Causing Displacement of PLU-1

Molecular cell, 2011-12, Vol.44 (5), p.770-784

2011

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UALCAN: An update to the integrated cancer data analysis platform

Gene Density, Transcription, and Insulators Contribute to the Partition of the Drosophila Genome into Physical Domains

Widespread Rearrangement of 3D Chromatin Organization Underlies Polycomb-Mediated Stress-Induced Silencing

DIVAN: accurate identification of non-coding disease-specific risk variants using multi-omics profiles

Targeting MLL1 H3K4 Methyltransferase Activity in Mixed-Lineage Leukemia

Therapeutic targeting of BET bromodomain proteins in castration-resistant prostate cancer

SAINT: probabilistic scoring of affinity purification-mass spectrometry data

Characterization of the EZH2-MMSET Histone Methyltransferase Regulatory Axis in Cancer

Integrative characterization of G-Quadruplexes in the three-dimensional chromatin structure

Truncation of mutant huntingtin in knock-in mice demonstrates exon1 huntingtin is a key pathogenic form

An Integrated Network of Androgen Receptor, Polycomb, and TMPRSS2-ERG Gene Fusions in Prostate Cancer Progression

Systematic Evaluation of DNA Sequence Variations on in vivo Transcription Factor Binding Affinity

NetAct: a computational platform to construct core transcription factor regulatory networks using gene activity

A machine learning approach to brain epigenetic analysis reveals kinases associated with Alzheimer's disease

Role of TET1-mediated epigenetic modulation in Alzheimer's disease

Association study in African-admixed populations across the Americas recapitulates asthma risk loci in non-African populations

A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome

A novel statistical method for quantitative comparison of multiple ChIP-seq datasets

Integrative Bayesian tensor regression for imaging genetics applications

p53-Mediated Activation of miRNA34 Candidate Tumor-Suppressor Genes

EWS/ETS-Driven Ewing Sarcoma Requires BET Bromodomain Proteins

The central role of EED in the orchestration of polycomb group complexes

Correction: Signatures of somatic mutations and gene expression from p16INK4A positive head and neck squamous cell carcinomas (HNSCC)

Cooperation between Polycomb and androgen receptor during oncogenic transformation

FOXP3 Orchestrates H4K16 Acetylation and H3K4 Trimethylation for Activation of Multiple Genes by Recruiting MOF and Causing Displacement of PLU-1

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