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Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle

Biochemical journal, 2013-12, Vol.456 (3), p.427-439

2013

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Structures of the Gβ-CCT and PhLP1–Gβ-CCT complexes reveal a mechanism for G-protein β-subunit folding and Gβγ dimer assembly

Proceedings of the National Academy of Sciences - PNAS, 2015-02, Vol.112 (8), p.2413-2418

2015

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The need for a public proteomics repository

Nature biotechnology, 2004-04, Vol.22 (4), p.471-472

2004

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A comprehensive protein-protein interactome for yeast PAS kinase 1 reveals direct inhibition of respiration through the phosphorylation of Cbf1

Molecular biology of the cell, 2014-07, Vol.25 (14), p.2199-2215

2014

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Yersinia pseudotuberculosis BarA-UvrY Two-Component Regulatory System Represses Biofilms via CsrB

Frontiers in cellular and infection microbiology, 2018-09, Vol.8, p.323-323

2018

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Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup

Journal of Virology, 2012-08, Vol.86 (15), p.7907-7917

2012

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LC-MS alignment in theory and practice: a comprehensive algorithmic review

Briefings in bioinformatics, 2015-01, Vol.16 (1), p.104-117

2015

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Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view

BMC bioinformatics, 2014, Vol.15 Suppl 7 (S7), p.S9-S9, Article S9

2014

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Novel algorithms and the benefits of comparative validation

Bioinformatics, 2013-06, Vol.29 (12), p.1583-1585

2013

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Chromatographic Alignment of ESI-LC-MS Proteomics Data Sets by Ordered Bijective Interpolated Warping

Analytical chemistry (Washington), 2006-09, Vol.78 (17), p.6140-6152

2006

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Probabilistic Generation of Mass Spectrometry Molecular Abundance Variance for Case and Control Replicates

Journal of proteome research, 2017-07, Vol.16 (7), p.2429-2434

2017

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JAMSS: proteomics mass spectrometry simulation in Java

Bioinformatics, 2015-03, Vol.31 (5), p.791-793

2015

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Metabolic-Stress-Induced Rearrangement of the 14-3-3ζ Interactome Promotes Autophagy via a ULK1- and AMPK-Regulated 14-3-3ζ Interaction with Phosphorylated Atg9

Molecular and cellular biology, 2014-12, Vol.34 (24), p.4379-4388

2014

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AICAR inhibits ceramide biosynthesis in skeletal muscle

Diabetology and metabolic syndrome, 2012-11, Vol.4 (1), p.45-45, Article 45

2012

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A coherent mathematical characterization of isotope trace extraction, isotopic envelope extraction, and LC-MS correspondence

BMC bioinformatics, 2015-04, Vol.16 Suppl 7 (S7), p.S1-S1, Article S1

2015

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Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal

BMC bioinformatics, 2015-04, Vol.16 Suppl 7 (S7), p.S2-S2, Article S2

2015

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Metriculator: quality assessment for mass spectrometry-based proteomics

Bioinformatics, 2013-11, Vol.29 (22), p.2948-2949

2013

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Construction, Cloning, and Expression of Synthetic Genes Encoding Spider Dragline Silk

Biochemistry (Easton), 1995-08, Vol.34 (34), p.10879-10885

1995

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Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection

Bioinformatics (Oxford, England), 2014-09, Vol.30 (18), p.2636-2643

2014

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The genomes, proteomes, and structures of three novel phages that infect the Bacillus cereus group and carry putative virulence factors

Journal of virology, 2014-10, Vol.88 (20), p.11846-11860

2014

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Statistical agglomeration: peak summarization for direct infusion lipidomics

Bioinformatics, 2013-10, Vol.29 (19), p.2445-2451

2013

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Whole blood and urine bioactive Hepcidin-25 determination using liquid chromatography mass spectrometry

Analytical biochemistry, 2017-01, Vol.517, p.23-30

2017

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Controlling for confounding variables in MS-omics protocol: why modularity matters

Briefings in bioinformatics, 2014-09, Vol.15 (5), p.768-770

2014

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Programmed Cell Death Protein 5 Interacts with the Cytosolic Chaperonin Containing Tailless Complex Polypeptide 1 (CCT) to Regulate β-Tubulin Folding

The Journal of biological chemistry, 2014-02, Vol.289 (7), p.4490-4502

2014

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Automated structural classification of lipids by machine learning

Bioinformatics, 2015-03, Vol.31 (5), p.621-625

2015

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Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle

Structures of the Gβ-CCT and PhLP1–Gβ-CCT complexes reveal a mechanism for G-protein β-subunit folding and Gβγ dimer assembly

The need for a public proteomics repository

A comprehensive protein-protein interactome for yeast PAS kinase 1 reveals direct inhibition of respiration through the phosphorylation of Cbf1

Yersinia pseudotuberculosis BarA-UvrY Two-Component Regulatory System Represses Biofilms via CsrB

Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup

LC-MS alignment in theory and practice: a comprehensive algorithmic review

Proteomics, lipidomics, metabolomics: a mass spectrometry tutorial from a computer scientist's point of view

Novel algorithms and the benefits of comparative validation

Chromatographic Alignment of ESI-LC-MS Proteomics Data Sets by Ordered Bijective Interpolated Warping

Probabilistic Generation of Mass Spectrometry Molecular Abundance Variance for Case and Control Replicates

JAMSS: proteomics mass spectrometry simulation in Java

Metabolic-Stress-Induced Rearrangement of the 14-3-3ζ Interactome Promotes Autophagy via a ULK1- and AMPK-Regulated 14-3-3ζ Interaction with Phosphorylated Atg9

AICAR inhibits ceramide biosynthesis in skeletal muscle

A coherent mathematical characterization of isotope trace extraction, isotopic envelope extraction, and LC-MS correspondence

Current controlled vocabularies are insufficient to uniquely map molecular entities to mass spectrometry signal

Metriculator: quality assessment for mass spectrometry-based proteomics

Construction, Cloning, and Expression of Synthetic Genes Encoding Spider Dragline Silk

Massifquant: open-source Kalman filter-based XC-MS isotope trace feature detection

The genomes, proteomes, and structures of three novel phages that infect the Bacillus cereus group and carry putative virulence factors

Statistical agglomeration: peak summarization for direct infusion lipidomics

Whole blood and urine bioactive Hepcidin-25 determination using liquid chromatography mass spectrometry

Controlling for confounding variables in MS-omics protocol: why modularity matters

Programmed Cell Death Protein 5 Interacts with the Cytosolic Chaperonin Containing Tailless Complex Polypeptide 1 (CCT) to Regulate β-Tubulin Folding

Automated structural classification of lipids by machine learning

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