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A targeted 3D EM and correlative microscopy method using SEM array tomography

Development (Cambridge), 2018-01, Vol.145 (12), p.dev160879-dev160879

2018

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STracking: a free and open-source Python library for particle tracking and analysis

Bioinformatics, 2022-07, Vol.38 (14), p.3671-3673

2022

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Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species

Nature microbiology, 2017-04, Vol.2 (6), p.17044, Article 17044

2017

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SPITFIR(e): a supermaneuverable algorithm for fast denoising and deconvolution of 3D fluorescence microscopy images and videos

Scientific reports, 2023-01, Vol.13 (1), p.1489-34, Article 1489

2023

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Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

PLoS computational biology, 2017-01, Vol.13 (1), p.e1005276-e1005276

2017

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Overproduction of ascorbic acid impairs pollen fertility in tomato

Journal of experimental botany, 2021-04, Vol.72 (8), p.3091-3107

2021

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Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites

BMC plant biology, 2023-07, Vol.23 (1), p.365-365, Article 365

2023

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Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling

Frontiers in plant science, 2019-10, Vol.10, p.1201-1201

2019

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Metabolomics to Exploit the Primed Immune System of Tomato Fruit

Metabolites, 2020-03, Vol.10 (3), p.96

2020

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Comparative Transcriptome Analysis Shows Conserved Metabolic Regulation during Production of Secondary Metabolites in Filamentous Fungi

mSystems, 2019, Vol.4 (2), p.e00012-19

2019

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Nature-Based Tourism Elicits a Phenotypic Shift in the Coping Abilities of Fish

Frontiers in physiology, 2018-02, Vol.9, p.13-13

2018

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BioImageIT: Open-source framework for integration of image data management with analysis

Nature methods, 2022-11, Vol.19 (11), p.1328-1330

2022

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Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis

Journal of experimental botany, 2024-05, Vol.75 (9), p.2631-2643

2024

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Genome‐scale model of Rhodotorula toruloides metabolism

Biotechnology and bioengineering, 2019-12, Vol.116 (12), p.3396-3408

2019

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Polyphenol Profiles of Just Pruned Grapevine Canes from Wild Vitis Accessions and Vitis vinifera Cultivars

Journal of agricultural and food chemistry, 2020-11, Vol.68 (47), p.13397-13407

2020

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Sparse denoising and adaptive estimation enhances the resolution and contrast of fluorescence emission difference microscopy based on an array detector

Optics letters, 2023-01, Vol.48 (2), p.498-501

2023

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Force Transmission between Three Tissues Controls Bipolar Planar Polarity Establishment and Morphogenesis

Current biology, 2019-04, Vol.29 (8), p.1360-1368.e4

2019

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Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis

Plant, cell and environment, 2021-05, Vol.44 (5), p.1504-1521

2021

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Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth

The Journal of nutrition, 2020-09, Vol.150 (9), p.2268-2277

2020

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Comparative constraint-based modelling of fruit development across species highlights nitrogen metabolism in the growth-defence trade-off

The Plant journal : for cell and molecular biology, 2023-11, Vol.116 (3), p.786-803

2023

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Empirical Sure-Guided Microscopy Super-Resolution Image Reconstruction from Confocal Multi-Array Detectors

ICASSP 2020 - 2020 IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP), 2020, p.1075-1079

2020

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Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

The New phytologist, 2022-06, Vol.234 (5), p.1614-1628

2022

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Enzyme-based kinetic modelling of ASC-GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability

The New phytologist, 2023-10, Vol.240 (1), p.242-257

2023

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Reconstruction of 24 Penicillium genome‐scale metabolic models shows diversity based on their secondary metabolism

Biotechnology and bioengineering, 2018-10, Vol.115 (10), p.2604-2612

2018

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Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species

Journal of experimental botany, 2020-10, Vol.71 (19), p.5823-5836

2020

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A targeted 3D EM and correlative microscopy method using SEM array tomography

STracking: a free and open-source Python library for particle tracking and analysis

Global analysis of biosynthetic gene clusters reveals vast potential of secondary metabolite production in Penicillium species

SPITFIR(e): a supermaneuverable algorithm for fast denoising and deconvolution of 3D fluorescence microscopy images and videos

Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks

Overproduction of ascorbic acid impairs pollen fertility in tomato

Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites

Regulation of Pyridine Nucleotide Metabolism During Tomato Fruit Development Through Transcript and Protein Profiling

Metabolomics to Exploit the Primed Immune System of Tomato Fruit

Comparative Transcriptome Analysis Shows Conserved Metabolic Regulation during Production of Secondary Metabolites in Filamentous Fungi

Nature-Based Tourism Elicits a Phenotypic Shift in the Coping Abilities of Fish

BioImageIT: Open-source framework for integration of image data management with analysis

Multi-regulated GDP-l-galactose phosphorylase calls the tune in ascorbate biosynthesis

Genome‐scale model of Rhodotorula toruloides metabolism

Polyphenol Profiles of Just Pruned Grapevine Canes from Wild Vitis Accessions and Vitis vinifera Cultivars

Sparse denoising and adaptive estimation enhances the resolution and contrast of fluorescence emission difference microscopy based on an array detector

Force Transmission between Three Tissues Controls Bipolar Planar Polarity Establishment and Morphogenesis

Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis

Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth

Comparative constraint-based modelling of fruit development across species highlights nitrogen metabolism in the growth-defence trade-off

Empirical Sure-Guided Microscopy Super-Resolution Image Reconstruction from Confocal Multi-Array Detectors

Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

Enzyme-based kinetic modelling of ASC-GSH cycle during tomato fruit development reveals the importance of reducing power and ROS availability

Reconstruction of 24 Penicillium genome‐scale metabolic models shows diversity based on their secondary metabolism

Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species

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