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Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization

Frontiers in microbiology, 2018-11, Vol.9, p.2779-2779

Pooggin, Mikhail M

2018

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How can plant DNA viruses evade siRNA-directed DNA methylation and silencing?

International Journal of Molecular Sciences, 2013-07, Vol.14 (8), p.15233-15259

Pooggin, Mikhail M

2013

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RNAi-mediated resistance to viruses: a critical assessment of methodologies

Current opinion in virology, 2017-10, Vol.26, p.28-35

Pooggin, Mikhail M

2017

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A newly emerging alphasatellite affects banana bunchy top virus replication, transcription, siRNA production and transmission by aphids

PLoS pathogens, 2022-04, Vol.18 (4), p.e1010448-e1010448

2022

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Plant virome reconstruction and antiviral RNAi characterization by deep sequencing of small RNAs from dried leaves

Scientific reports, 2019-12, Vol.9 (1), p.19268-10, Article 19268

2019

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Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants

The New phytologist, 2016-08, Vol.211 (3), p.1020-1034

2016

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Silencing and innate immunity in plant defense against viral and non-viral pathogens

Viruses, 2012-10, Vol.4 (11), p.2578-2597

2012

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De novo reconstruction of consensus master genomes of plant RNA and DNA viruses from siRNAs

PloS one, 2014-02, Vol.9 (2), p.e88513-e88513

2014

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ICTV Virus Taxonomy Profile: Caulimoviridae

Journal of general virology, 2020-10, Vol.101 (10), p.1025-1026

2020

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Primary and secondary siRNAs in geminivirus-induced gene silencing

PLoS pathogens, 2012-09, Vol.8 (9), p.e1002941-e1002941

2012

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Transcriptome and small RNAome profiling uncovers how a recombinant begomovirus evades RDRγ-mediated silencing of viral genes and outcompetes its parental virus in mixed infection

PLoS pathogens, 2024-01, Vol.20 (1), p.e1011941-e1011941

2024

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Ribosome Shunting, Polycistronic Translation, and Evasion of Antiviral Defenses in Plant Pararetroviruses and Beyond

Frontiers in microbiology, 2018-04, Vol.9, p.644-644

2018

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Revisiting the Roles of Tobamovirus Replicase Complex Proteins in Viral Replication and Silencing Suppression

Molecular plant-microbe interactions, 2018-01, Vol.31 (1), p.125-144

2018

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Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense

Nucleic acids research, 2011-07, Vol.39 (12), p.5003

2011

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Virus Elimination from Naturally Infected Field Cultivars of Potato (Solanum tuberosum) by Transgenic RNA Interference

International journal of molecular sciences, 2022-07, Vol.23 (14), p.8020

2022

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MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies

Journal of virological methods, 2016-07, Vol.233, p.37-40

2016

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Transcriptomic alterations in the sweet orange vasculature correlate with growth repression induced by a variant of citrus tristeza virus

Frontiers in microbiology, 2023-04, Vol.14, p.1162613-1162613

2023

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Small RNA-omics for virome reconstruction and antiviral defense characterization in mixed infections of cultivated Solanum plants

Molecular plant-microbe interactions, 2018-07, Vol.31 (7), p.707-723

2018

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Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus

Molecular plant-microbe interactions, 2016-03, Vol.29 (3), p.197-209

2016

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RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA

Nucleic acids research, 2012-01, Vol.40 (2), p.594

2012

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Interactions of Rice tungro bacilliform pararetrovirus and its protein P4 with plant RNA-silencing machinery

Molecular plant-microbe interactions, 2014-12, Vol.27 (12), p.1370-1378

2014

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Cannabis Virome Reconstruction and Antiviral RNAi Characterization through Small RNA Sequencing

Plants (Basel), 2023-11, Vol.12 (23), p.3925

2023

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Topical Application of Double-Stranded RNA Targeting 2b and CP Genes of Cucumber mosaic virus Protects Plants against Local and Systemic Viral Infection

Plants (Basel), 2021-05, Vol.10 (5), p.963

2021

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Comparative Plant Transcriptome Profiling of Arabidopsis thaliana Col-0 and Camelina sativa var. Celine Infested with Myzus persicae Aphids Acquiring Circulative and Noncirculative Viruses Reveals Virus- and Plant-Specific Alterations Relevant to Aphid Feeding Behavior and Transmission

Microbiology spectrum, 2022-07, Vol.10 (4), p.e0013622-e0013622

2022

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Identification and Molecular Characterization of a Novel Hordeivirus Associated With Yellow Mosaic Disease of Privet (Ligustrum vulgare) in Europe

Frontiers in microbiology, 2021-09, Vol.12, p.723350-723350

2021

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Small RNA-Omics for Plant Virus Identification, Virome Reconstruction, and Antiviral Defense Characterization

How can plant DNA viruses evade siRNA-directed DNA methylation and silencing?

RNAi-mediated resistance to viruses: a critical assessment of methodologies

A newly emerging alphasatellite affects banana bunchy top virus replication, transcription, siRNA production and transmission by aphids

Plant virome reconstruction and antiviral RNAi characterization by deep sequencing of small RNAs from dried leaves

Viral protein suppresses oxidative burst and salicylic acid-dependent autophagy and facilitates bacterial growth on virus-infected plants

Silencing and innate immunity in plant defense against viral and non-viral pathogens

De novo reconstruction of consensus master genomes of plant RNA and DNA viruses from siRNAs

ICTV Virus Taxonomy Profile: Caulimoviridae

Primary and secondary siRNAs in geminivirus-induced gene silencing

Transcriptome and small RNAome profiling uncovers how a recombinant begomovirus evades RDRγ-mediated silencing of viral genes and outcompetes its parental virus in mixed infection

Ribosome Shunting, Polycistronic Translation, and Evasion of Antiviral Defenses in Plant Pararetroviruses and Beyond

Revisiting the Roles of Tobamovirus Replicase Complex Proteins in Viral Replication and Silencing Suppression

Massive production of small RNAs from a non-coding region of Cauliflower mosaic virus in plant defense and viral counter-defense

Virus Elimination from Naturally Infected Field Cultivars of Potato (Solanum tuberosum) by Transgenic RNA Interference

MISIS-2: A bioinformatics tool for in-depth analysis of small RNAs and representation of consensus master genome in viral quasispecies

Transcriptomic alterations in the sweet orange vasculature correlate with growth repression induced by a variant of citrus tristeza virus

Small RNA-omics for virome reconstruction and antiviral defense characterization in mixed infections of cultivated Solanum plants

Field Trial and Molecular Characterization of RNAi-Transgenic Tomato Plants That Exhibit Resistance to Tomato Yellow Leaf Curl Geminivirus

RDR6-mediated synthesis of complementary RNA is terminated by miRNA stably bound to template RNA

Interactions of Rice tungro bacilliform pararetrovirus and its protein P4 with plant RNA-silencing machinery

Cannabis Virome Reconstruction and Antiviral RNAi Characterization through Small RNA Sequencing

Topical Application of Double-Stranded RNA Targeting 2b and CP Genes of Cucumber mosaic virus Protects Plants against Local and Systemic Viral Infection

Comparative Plant Transcriptome Profiling of Arabidopsis thaliana Col-0 and Camelina sativa var. Celine Infested with Myzus persicae Aphids Acquiring Circulative and Noncirculative Viruses Reveals Virus- and Plant-Specific Alterations Relevant to Aphid Feeding Behavior and Transmission

Identification and Molecular Characterization of a Novel Hordeivirus Associated With Yellow Mosaic Disease of Privet (Ligustrum vulgare) in Europe

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