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DiviK: divisive intelligent K-means for hands-free unsupervised clustering in big biological data

BMC bioinformatics, 2022-12, Vol.23 (1), p.538-538, Article 538

2022

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GMM-Based Expanded Feature Space as a Way to Extract Useful Information for Rare Cell Subtypes Identification in Single-Cell Mass Cytometry

International journal of molecular sciences, 2023-09, Vol.24 (18), p.14033

2023

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Ranking metrics in gene set enrichment analysis: do they matter?

BMC bioinformatics, 2017-05, Vol.18 (1), p.256-256, Article 256

2017

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Pro-death signaling of cytoprotective heat shock factor 1: upregulation of NOXA leading to apoptosis in heat-sensitive cells

Cell death and differentiation, 2020-07, Vol.27 (7), p.2280-2292

2020

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Relative effect size-based profiles as an alternative to differentiation analysis in multi-species single-cell transcriptional studies

PloS one, 2024-06, Vol.19 (6), p.e0305874

2024

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BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm

Bioinformatics (Oxford, England), 2019-06, Vol.35 (11), p.1885-1892

2019

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Analysis of the Applicability of microRNAs in Peripheral Blood Leukocytes as Biomarkers of Sensitivity and Exposure to Fractionated Radiotherapy towards Breast Cancer

International journal of molecular sciences, 2021-08, Vol.22 (16), p.8705

2021

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Tissue fixed with formalin and processed without paraffin embedding is suitable for imaging of both peptides and lipids by MALDI-IMS

Proteomics (Weinheim), 2016-06, Vol.16 (11-12), p.1670-1677

2016

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Influence of single-cell RNA sequencing data integration on the performance of differential gene expression analysis

Frontiers in genetics, 2022-11, Vol.13, p.1009316-1009316

2022

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Symptom-based early-stage differentiation between SARS-CoV-2 versus other respiratory tract infections—Upper Silesia pilot study

Scientific reports, 2021-06, Vol.11 (1), p.13580-13, Article 13580

2021

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Signal Partitioning Algorithm for Highly Efficient Gaussian Mixture Modeling in Mass Spectrometry

PloS one, 2015-07, Vol.10 (7), p.e0134256-e0134256

2015

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Importance of SNP Dependency Correction and Association Integration for Gene Set Analysis in Genome-Wide Association Studies

Frontiers in genetics, 2021-12, Vol.12, p.767358-767358

2021

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Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms

Bioinformatics and Biomedical Engineering, p.103-112

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Stage I non-small-cell lung cancer: long-term results of lobectomy versus sublobar resection from the Polish National Lung Cancer Registry

European journal of cardio-thoracic surgery, 2017-08, Vol.52 (2), p.363-369

2017

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Body mass index, basal insulin and glycemic control in children with type 1 diabetes treated with the advanced hybrid closed loop system remain stable - 1-year prospective, observational, two-center study

Frontiers in endocrinology (Lausanne), 2022-10, Vol.13, p.1036808-1036808

2022

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Sex- and age-specific aspects of human peripheral T-cell dynamics

Frontiers in immunology, 2023-10, Vol.14, p.1224304-1224304

2023

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Activation maps of convolutional neural networks as a tool for brain degeneration tracking in early diagnosis of dementia in Parkinson’s disease based on magnetic resonance imaging

Signal, image and video processing, 2023-11, Vol.17 (8), p.4115-4121

2023

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Ionizing radiation affects the composition of the proteome of extracellular vesicles released by head-and-neck cancer cells in vitro

Journal of radiation research, 2019-05, Vol.60 (3), p.289-297

2019

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Transcriptomic Profile of Mouse Brain Ageing in Early Developmental Stages

Brain sciences, 2024-06, Vol.14 (6), p.581

2024

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Multivariate piecewise linear regression model to predict radiosensitivity using the association with the genome-wide copy number variation

Frontiers in oncology, 2023-10, Vol.13, p.1154222-1154222

2023

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Region-Specific Methylation Profiling in Acute Myeloid Leukemia

Interdisciplinary sciences : computational life sciences, 2018-03, Vol.10 (1), p.33-42

2018

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Analysing Intercellular Communication in Astrocytic Networks Using “Astral”

Frontiers in cellular neuroscience, 2021-06, Vol.15, p.689268-689268

2021

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Transcriptional Inflammatory Signature in Healthy Donors and Different Radiotherapy Cancer Patients

International journal of molecular sciences, 2024-01, Vol.25 (2), p.1080

2024

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Integrative multiomics study for validation of mechanisms in radiation-induced ischemic heart disease in Mayak workers

PloS one, 2018-12, Vol.13 (12), p.e0209626-e0209626

2018

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The Lipid Composition of Serum-Derived Small Extracellular Vesicles in Participants of a Lung Cancer Screening Study

Cancers, 2021-07, Vol.13 (14), p.3414

2021

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DiviK: divisive intelligent K-means for hands-free unsupervised clustering in big biological data

GMM-Based Expanded Feature Space as a Way to Extract Useful Information for Rare Cell Subtypes Identification in Single-Cell Mass Cytometry

Ranking metrics in gene set enrichment analysis: do they matter?

Pro-death signaling of cytoprotective heat shock factor 1: upregulation of NOXA leading to apoptosis in heat-sensitive cells

Relative effect size-based profiles as an alternative to differentiation analysis in multi-species single-cell transcriptional studies

BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm

Analysis of the Applicability of microRNAs in Peripheral Blood Leukocytes as Biomarkers of Sensitivity and Exposure to Fractionated Radiotherapy towards Breast Cancer

Tissue fixed with formalin and processed without paraffin embedding is suitable for imaging of both peptides and lipids by MALDI-IMS

Influence of single-cell RNA sequencing data integration on the performance of differential gene expression analysis

Symptom-based early-stage differentiation between SARS-CoV-2 versus other respiratory tract infections—Upper Silesia pilot study

Signal Partitioning Algorithm for Highly Efficient Gaussian Mixture Modeling in Mass Spectrometry

Importance of SNP Dependency Correction and Association Integration for Gene Set Analysis in Genome-Wide Association Studies

Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms

Stage I non-small-cell lung cancer: long-term results of lobectomy versus sublobar resection from the Polish National Lung Cancer Registry

Body mass index, basal insulin and glycemic control in children with type 1 diabetes treated with the advanced hybrid closed loop system remain stable - 1-year prospective, observational, two-center study

Sex- and age-specific aspects of human peripheral T-cell dynamics

Activation maps of convolutional neural networks as a tool for brain degeneration tracking in early diagnosis of dementia in Parkinson’s disease based on magnetic resonance imaging

Ionizing radiation affects the composition of the proteome of extracellular vesicles released by head-and-neck cancer cells in vitro

Transcriptomic Profile of Mouse Brain Ageing in Early Developmental Stages

Multivariate piecewise linear regression model to predict radiosensitivity using the association with the genome-wide copy number variation

Region-Specific Methylation Profiling in Acute Myeloid Leukemia

Analysing Intercellular Communication in Astrocytic Networks Using “Astral”

Transcriptional Inflammatory Signature in Healthy Donors and Different Radiotherapy Cancer Patients

Integrative multiomics study for validation of mechanisms in radiation-induced ischemic heart disease in Mayak workers

The Lipid Composition of Serum-Derived Small Extracellular Vesicles in Participants of a Lung Cancer Screening Study

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