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PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets

PloS one, 2012-08, Vol.7 (8), p.e43093-e43093

2012

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Bacterial Community Structure in the Drinking Water Microbiome Is Governed by Filtration Processes

Environmental science & technology, 2012-08, Vol.46 (16), p.8851-8859

2012

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Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities

Applied and environmental microbiology, 2016-10, Vol.82 (19), p.5878-5891

2016

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Spatial-temporal survey and occupancy-abundance modeling to predict bacterial community dynamics in the drinking water microbiome

mBio, 2014-07, Vol.5 (3), p.e01135

2014

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The active microbial community more accurately reflects the anaerobic digestion process: 16S rRNA (gene) sequencing as a predictive tool

Microbiome, 2018-04, Vol.6 (1), p.63-63, Article 63

2018

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NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform

Gigascience, 2018-12, Vol.7 (12)

2018

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Disinfection exhibits systematic impacts on the drinking water microbiome

Microbiome, 2020-03, Vol.8 (1), p.42-42, Article 42

2020

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Probabilistic models to describe the dynamics of migrating microbial communities

PloS one, 2015-03, Vol.10 (3), p.e0117221-e0117221

2015

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Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers

Microbiology spectrum, 2024-05, Vol.12 (5), p.e0318123-e0318123

2024

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Microbial Nitrogen Metabolism in Chloraminated Drinking Water Reservoirs

mSphere, 2020-04, Vol.5 (2)

2020

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Applying biotechnology for drinking water biofiltration: advancing science and practice

Current opinion in biotechnology, 2019-06, Vol.57, p.197-204

2019

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The control of disinfection byproducts and their precursors in biologically active filtration processes

Water research (Oxford), 2017-11, Vol.124, p.630-653

2017

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Long solids retention times and attached growth phase favor prevalence of comammox bacteria in nitrogen removal systems

Water research (Oxford), 2020-02, Vol.169, p.115268-115268, Article 115268

2020

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Electrochemical sensors for identifying pyocyanin production in clinical Pseudomonas aeruginosa isolates

Biosensors & bioelectronics, 2017-11, Vol.97, p.65-69

2017

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Bioreactor Function under Perturbation Scenarios Is Affected by Interactions between Bacteria and Protozoa

Environmental science & technology, 2012-07, Vol.46 (14), p.7558-7566

2012

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Community structure and function during periods of high performance and system upset in a full-scale mixed microalgal wastewater resource recovery facility

Water research (Oxford), 2024-08, Vol.259 (C), p.121819, Article 121819

2024

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Spatial-temporal targeted and non-targeted surveys to assess microbiological composition of drinking water in Puerto Rico following Hurricane Maria

Water research X, 2021-12, Vol.13, p.100123, Article 100123

2021

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Impact of solids residence time on community structure and nutrient dynamics of mixed phototrophic wastewater treatment systems

Water research (Oxford), 2019-03, Vol.150, p.271-282

2019

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Co-Occurrence and Cooperation between Comammox and Anammox Bacteria in a Full-Scale Attached Growth Municipal Wastewater Treatment Process

Environmental science & technology, 2023-03, Vol.57 (12), p.5013-5023

2023

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Gradual Recovery of Building Plumbing-Associated Microbial Communities after Extended Periods of Altered Water Demand during the COVID-19 Pandemic

Environmental science & technology, 2023-02, Vol.57 (8), p.3248-3259

2023

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Low diversity and microdiversity of comammox bacteria in wastewater systems suggest specific adaptations within the Ca. Nitrospira nitrosa cluster

Water research (Oxford), 2023-02, Vol.229, p.119497-119497, Article 119497

2023

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Drinking Water Microbiome Project: Is it Time?

Trends in microbiology (Regular ed.), 2019-08, Vol.27 (8), p.670-677

2019

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Intensive Microalgal Cultivation and Tertiary Phosphorus Recovery from Wastewaters via the EcoRecover Process

Environmental science & technology, 2024-05, Vol.58 (20), p.8803-8814

2024

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The impact of sampling, PCR, and sequencing replication on discerning changes in drinking water bacterial community over diurnal time-scales

Water research (Oxford), 2016-03, Vol.90, p.216-224

2016

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Identifying Eukaryotes and Factors Influencing Their Biogeography in Drinking Water Metagenomes

Environmental science & technology, 2023-03, Vol.57 (9), p.3645-3660

2023

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PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets

Bacterial Community Structure in the Drinking Water Microbiome Is Governed by Filtration Processes

Design and Evaluation of Illumina MiSeq-Compatible, 18S rRNA Gene-Specific Primers for Improved Characterization of Mixed Phototrophic Communities

Spatial-temporal survey and occupancy-abundance modeling to predict bacterial community dynamics in the drinking water microbiome

The active microbial community more accurately reflects the anaerobic digestion process: 16S rRNA (gene) sequencing as a predictive tool

NanoAmpli-Seq: a workflow for amplicon sequencing for mixed microbial communities on the nanopore sequencing platform

Disinfection exhibits systematic impacts on the drinking water microbiome

Probabilistic models to describe the dynamics of migrating microbial communities

Nitrogen source influences the interactions of comammox bacteria with aerobic nitrifiers

Microbial Nitrogen Metabolism in Chloraminated Drinking Water Reservoirs

Applying biotechnology for drinking water biofiltration: advancing science and practice

The control of disinfection byproducts and their precursors in biologically active filtration processes

Long solids retention times and attached growth phase favor prevalence of comammox bacteria in nitrogen removal systems

Electrochemical sensors for identifying pyocyanin production in clinical Pseudomonas aeruginosa isolates

Bioreactor Function under Perturbation Scenarios Is Affected by Interactions between Bacteria and Protozoa

Community structure and function during periods of high performance and system upset in a full-scale mixed microalgal wastewater resource recovery facility

Spatial-temporal targeted and non-targeted surveys to assess microbiological composition of drinking water in Puerto Rico following Hurricane Maria

Impact of solids residence time on community structure and nutrient dynamics of mixed phototrophic wastewater treatment systems

Co-Occurrence and Cooperation between Comammox and Anammox Bacteria in a Full-Scale Attached Growth Municipal Wastewater Treatment Process

Gradual Recovery of Building Plumbing-Associated Microbial Communities after Extended Periods of Altered Water Demand during the COVID-19 Pandemic

Low diversity and microdiversity of comammox bacteria in wastewater systems suggest specific adaptations within the Ca. Nitrospira nitrosa cluster

Drinking Water Microbiome Project: Is it Time?

Intensive Microalgal Cultivation and Tertiary Phosphorus Recovery from Wastewaters via the EcoRecover Process

The impact of sampling, PCR, and sequencing replication on discerning changes in drinking water bacterial community over diurnal time-scales

Identifying Eukaryotes and Factors Influencing Their Biogeography in Drinking Water Metagenomes

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