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Interactive exploration of RNA22 microRNA target predictions

Bioinformatics, 2012-12, Vol.28 (24), p.3322-3323

2012

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Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers

Proceedings of the National Academy of Sciences - PNAS, 2015-07, Vol.112 (29), p.E3816-E3825

2015

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Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types

Nucleic acids research, 2017-04, Vol.45 (6), p.2973-2985

2017

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The microRNAs within the DLK1-DIO3 genomic region: involvement in disease pathogenesis

Cellular and molecular life sciences : CMLS, 2013-03, Vol.70 (5), p.795-814

2013

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YAMAT-seq: an efficient method for high-throughput sequencing of mature transfer RNAs

Nucleic acids research, 2017-05, Vol.45 (9), p.e70

2017

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IsomiR expression profiles in human lymphoblastoid cell lines exhibit population and gender dependencies

Oncotarget, 2014-09, Vol.5 (18), p.8790-8802

2014

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Machine Learning Approaches Identify Genes Containing Spatial Information From Single-Cell Transcriptomics Data

Frontiers in genetics, 2021-02, Vol.11, p.612840-612840

2021

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Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner

BMC biology, 2020-04, Vol.18 (1), p.38-38, Article 38

2020

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The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells

Nucleic acids research, 2017-09, Vol.45 (15), p.9108-9120

2017

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A comprehensive map of alternative polyadenylation in African American and European American lung cancer patients

Nature communications, 2021-09, Vol.12 (1), p.5605-12, Article 5605

2021

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Unraveling the role of microRNA/isomiR network in multiple primary melanoma pathogenesis

Cell death & disease, 2021-05, Vol.12 (5), p.473-473, Article 473

2021

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The complex transcriptional landscape of the anucleate human platelet

BMC genomics, 2013-01, Vol.14 (1), p.1-1

2013

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The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type

BMC biology, 2024-09, Vol.22 (1), p.205-21, Article 205

2024

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Interferon α-induced SAMHD1 regulates human cultured megakaryocyte apoptosis and proplatelet formation

Haematologica (Roma), 2022-02, Vol.107 (2), p.558-561

2022

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Reply to Backes and Keller: Identification of novel tissue-specific and primate-specific human microRNAs

Proceedings of the National Academy of Sciences - PNAS, 2015-06, Vol.112 (22), p.E2851-E2851

2015

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Molecular dynamics simulations of Ago silencing complexes reveal a large repertoire of admissible 'seed-less' targets

Scientific reports, 2012-08, Vol.2 (1), p.569-569, Article 569

2012

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Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells

Scientific reports, 2017-06, Vol.7 (1), p.4110-11, Article 4110

2017

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The Typical tRNA Co-Expresses Multiple 5′ tRNA Halves Whose Sequences and Abundances Depend on Isodecoder and Isoacceptor and Change with Tissue Type, Cell Type, and Disease

Non-coding RNA, 2023-12, Vol.9 (6), p.69

2023

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Using medicare claims to estimate risk-adjusted performance of Pennsylvania trauma centers

PLOS digital health, 2023-06, Vol.2 (6), p.e0000263-e0000263

2023

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MINTmap: fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data

Scientific reports, 2017-02, Vol.7 (1), p.41184-41184, Article 41184

2017

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MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects

Nucleic acids research, 2018-01, Vol.46 (D1), p.D152-D159

2018

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Beyond the one-locus-one-miRNA paradigm: microRNA isoforms enable deeper insights into breast cancer heterogeneity

Nucleic acids research, 2015-10, Vol.43 (19), p.9158-9175

2015

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tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities

Cancer research (Chicago, Ill.), 2019-06, Vol.79 (12), p.3034-3049

2019

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MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments

Bioinformatics (Oxford, England), 2016-08, Vol.32 (16), p.2481-2489

2016

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Interactive exploration of RNA22 microRNA target predictions

Sex hormone-dependent tRNA halves enhance cell proliferation in breast and prostate cancers

Knowledge about the presence or absence of miRNA isoforms (isomiRs) can successfully discriminate amongst 32 TCGA cancer types

The microRNAs within the DLK1-DIO3 genomic region: involvement in disease pathogenesis

YAMAT-seq: an efficient method for high-throughput sequencing of mature transfer RNAs

IsomiR expression profiles in human lymphoblastoid cell lines exhibit population and gender dependencies

Machine Learning Approaches Identify Genes Containing Spatial Information From Single-Cell Transcriptomics Data

Ribosomal RNA fragmentation into short RNAs (rRFs) is modulated in a sex- and population of origin-specific manner

The biogenesis pathway of tRNA-derived piRNAs in Bombyx germ cells

A comprehensive map of alternative polyadenylation in African American and European American lung cancer patients

Unraveling the role of microRNA/isomiR network in multiple primary melanoma pathogenesis

The complex transcriptional landscape of the anucleate human platelet

The subcellular distribution of miRNA isoforms, tRNA-derived fragments, and rRNA-derived fragments depends on nucleotide sequence and cell type

Interferon α-induced SAMHD1 regulates human cultured megakaryocyte apoptosis and proplatelet formation

Reply to Backes and Keller: Identification of novel tissue-specific and primate-specific human microRNAs

Molecular dynamics simulations of Ago silencing complexes reveal a large repertoire of admissible 'seed-less' targets

Increasing cell density globally enhances the biogenesis of Piwi-interacting RNAs in Bombyx mori germ cells

The Typical tRNA Co-Expresses Multiple 5′ tRNA Halves Whose Sequences and Abundances Depend on Isodecoder and Isoacceptor and Change with Tissue Type, Cell Type, and Disease

Using medicare claims to estimate risk-adjusted performance of Pennsylvania trauma centers

MINTmap: fast and exhaustive profiling of nuclear and mitochondrial tRNA fragments from short RNA-seq data

Gene selection for optimal prediction of cell position in tissues from single-cell transcriptomics data

MINTbase v2.0: a comprehensive database for tRNA-derived fragments that includes nuclear and mitochondrial fragments from all The Cancer Genome Atlas projects

Beyond the one-locus-one-miRNA paradigm: microRNA isoforms enable deeper insights into breast cancer heterogeneity

tRNA Fragments Show Intertwining with mRNAs of Specific Repeat Content and Have Links to Disparities

MINTbase: a framework for the interactive exploration of mitochondrial and nuclear tRNA fragments

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