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Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia

BMC microbiology, 2019-03, Vol.19 (1), p.59-14, Article 59

2019

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Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data

Journal of antimicrobial chemotherapy, 2013-10, Vol.68 (10), p.2234-2244

2013

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Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli

Scientific reports, 2017-07, Vol.7 (1), p.5917-11, Article 5917

2017

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Genome sequencing of an extended series of NDM-producing Klebsiella pneumoniae isolates from neonatal infections in a Nepali hospital characterizes the extent of community- versus hospital-associated transmission in an endemic setting

Antimicrobial agents and chemotherapy, 2014-12, Vol.58 (12), p.7347-7357

2014

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Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania

Journal of antimicrobial chemotherapy, 2018-03, Vol.73 (3), p.672-679

2018

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Comparison of Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Investigation of Clostridium difficile Transmission

Journal of Clinical Microbiology, 2013-12, Vol.51 (12), p.4141-4149

2013

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Predictors of First Recurrence of Clostridium difficile Infection: Implications for Initial Management

Clinical infectious diseases, 2012-08, Vol.55 (suppl 2), p.S77-S87

2012

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Multiple-strain colonization in nasal carriers of Staphylococcus aureus

Journal of clinical microbiology, 2014-04, Vol.52 (4), p.1192-1200

2014

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Interaction of malaria with a common form of severe thalassemia in an Asian population

Proceedings of the National Academy of Sciences - PNAS, 2009-11, Vol.106 (44), p.18716-18721

2009

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Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing

Journal of clinical microbiology, 2014-04, Vol.52 (4), p.1182-1191

2014

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Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing

Clinical microbiology and infection, 2017-03, Vol.23 (3), p.161-166

2017

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Age-related changes in adaptation to severe anemia in childhood in developing countries

Proceedings of the National Academy of Sciences - PNAS, 2007-05, Vol.104 (22), p.9440-9444

2007

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Reply to Walk et al

Clinical infectious diseases, 2013-08, Vol.57 (4), p.626-627

2013

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Increasing incidence of Escherichia coli bacteraemia is driven by an increase in antibiotic-resistant isolates: electronic database study in Oxfordshire 1999-2011

Journal of antimicrobial chemotherapy, 2012-06, Vol.67 (6), p.1514-1524

2012

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Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses

Journal of clinical microbiology, 2015-07, Vol.53 (7), p.2122-2131

2015

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Contact investigations for outbreaks of Mycobacterium tuberculosis: advances through whole genome sequencing

Clinical microbiology and infection, 2013-09, Vol.19 (9), p.796-802

2013

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Genomic dynamics of species and mobile genetic elements in a prolonged blaIMP-4-associated carbapenemase outbreak in an Australian hospital

Journal of antimicrobial chemotherapy, 2020-04, Vol.75 (4), p.873-882

2020

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Adaptation and implementation of the ARK (Antibiotic Review Kit) intervention to safely and substantially reduce antibiotic use in hospitals: a feasibility study

The Journal of hospital infection, 2019-11, Vol.103 (3), p.268-275

2019

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Intervention planning for Antibiotic Review Kit (ARK): a digital and behavioural intervention to safely review and reduce antibiotic prescriptions in acute and general medicine

Journal of antimicrobial chemotherapy, 2019-11, Vol.74 (11), p.3362-3370

2019

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Dynamics of MDR Enterobacter cloacae outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing

Journal of antimicrobial chemotherapy, 2015-04, Vol.70 (4), p.1008-1015

2015

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Multi-site and nasal swabbing for carriage of Staphylococcus aureus : what does a single nose swab predict?

The Journal of hospital infection, 2017-07, Vol.96 (3), p.232-237

2017

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Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis

QJM : An International Journal of Medicine, 2016-12, Vol.109 (12), p.819-820

2016

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Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation

Journal of clinical microbiology, 2017-07, Vol.55 (7), p.2188-2197

2017

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Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis-response

QJM : An International Journal of Medicine, 2017-09, Vol.110 (9), p.613-613

2017

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Healthcare-associated outbreak of meticillin-resistant Staphylococcus aureus bacteraemia: role of a cryptic variant of an epidemic clone

The Journal of hospital infection, 2014-02, Vol.86 (2), p.83-89

2014

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Epidemiology of paediatric gastrointestinal colonisation by extended spectrum cephalosporin-resistant Escherichia coli and Klebsiella pneumoniae isolates in north-west Cambodia

Predicting antimicrobial susceptibilities for Escherichia coli and Klebsiella pneumoniae isolates using whole genomic sequence data

Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing Escherichia coli

Genome sequencing of an extended series of NDM-producing Klebsiella pneumoniae isolates from neonatal infections in a Nepali hospital characterizes the extent of community- versus hospital-associated transmission in an endemic setting

Illumina short-read and MinION long-read WGS to characterize the molecular epidemiology of an NDM-1 Serratia marcescens outbreak in Romania

Comparison of Multilocus Variable-Number Tandem-Repeat Analysis and Whole-Genome Sequencing for Investigation of Clostridium difficile Transmission

Predictors of First Recurrence of Clostridium difficile Infection: Implications for Initial Management

Multiple-strain colonization in nasal carriers of Staphylococcus aureus

Interaction of malaria with a common form of severe thalassemia in an Asian population

Prediction of Staphylococcus aureus antimicrobial resistance by whole-genome sequencing

Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing

Age-related changes in adaptation to severe anemia in childhood in developing countries

Reply to Walk et al

Increasing incidence of Escherichia coli bacteraemia is driven by an increase in antibiotic-resistant isolates: electronic database study in Oxfordshire 1999-2011

Extensive Within-Host Diversity in Fecally Carried Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli Isolates: Implications for Transmission Analyses

Contact investigations for outbreaks of Mycobacterium tuberculosis: advances through whole genome sequencing

Genomic dynamics of species and mobile genetic elements in a prolonged blaIMP-4-associated carbapenemase outbreak in an Australian hospital

Adaptation and implementation of the ARK (Antibiotic Review Kit) intervention to safely and substantially reduce antibiotic use in hospitals: a feasibility study

Intervention planning for Antibiotic Review Kit (ARK): a digital and behavioural intervention to safely review and reduce antibiotic prescriptions in acute and general medicine

Dynamics of MDR Enterobacter cloacae outbreaks in a neonatal unit in Nepal: insights using wider sampling frames and next-generation sequencing

Multi-site and nasal swabbing for carriage of Staphylococcus aureus : what does a single nose swab predict?

Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation

Whole-genome sequencing identifies nosocomial transmission of extra-pulmonary M. tuberculosis-response

Healthcare-associated outbreak of meticillin-resistant Staphylococcus aureus bacteraemia: role of a cryptic variant of an epidemic clone

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