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Twenty years of bacterial genome sequencing

Nature reviews. Microbiology, 2015-12, Vol.13 (12), p.787-794

2015

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Assembly of hundreds of novel bacterial genomes from the chicken caecum

Genome Biology, 2020-02, Vol.21 (1), p.34-34, Article 34

2020

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Extensive microbial and functional diversity within the chicken cecal microbiome

PloS one, 2014-03, Vol.9 (3), p.e91941

2014

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Performance comparison of benchtop high-throughput sequencing platforms

Nature biotechnology, 2012-05, Vol.30 (5), p.434-439

2012

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The Enigmatic Esx Proteins: Looking Beyond Mycobacteria

Trends in microbiology (Regular ed.), 2017-03, Vol.25 (3), p.192-204

2017

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The Next Million Names for Archaea and Bacteria

Trends in microbiology (Regular ed.), 2021-04, Vol.29 (4), p.289-298

2021

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Identification of novel imidazo[1,2-a]pyridine inhibitors targeting M. tuberculosis QcrB

PloS one, 2012-12, Vol.7 (12), p.e52951-e52951

2012

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High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

Nature reviews. Microbiology, 2012-09, Vol.10 (9), p.599-606

2012

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Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure

Journal of antimicrobial chemotherapy, 2015-08, Vol.70 (8), p.2241-2248

2015

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Defining bacterial species in the genomic era: insights from the genus Acinetobacter

BMC microbiology, 2012-12, Vol.12 (1), p.302-302, Article 302

2012

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Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture

PeerJ (San Francisco, CA), 2021-04, Vol.9, p.e10941-e10941, Article e10941

2021

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High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature

PloS one, 2012-05, Vol.7 (5), p.e38094-e38094

2012

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High-throughput sequencing and clinical microbiology: progress, opportunities and challenges

Current opinion in microbiology, 2010-10, Vol.13 (5), p.625-631

2010

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The ESAT-6/WXG100 superfamily – and a new Gram-positive secretion system?

Trends in microbiology (Regular ed.), 2002-05, Vol.10 (5), p.209-212

Pallen, Mark J

2002

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The dynamic history of prokaryotic phyla: discovery, diversity and division

International journal of systematic and evolutionary microbiology, 2024-09, Vol.74 (9)

Pallen, Mark J

2024

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Metagenomic profiling of ticks: Identification of novel rickettsial genomes and detection of tick-borne canine parvovirus

PLoS neglected tropical diseases, 2019-01, Vol.13 (1), p.e0006805-e0006805

2019

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Valid publication of names for bacterial species from the chicken gut

International journal of systematic and evolutionary microbiology, 2024-07, Vol.74 (7)

Pallen, Mark J

2024

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Use of connecting vowels after stems ending in the same vowel: a proposal to emend Appendix 9 of the International Code of Nomenclature of Prokaryotes

International journal of systematic and evolutionary microbiology, 2023-12, Vol.73 (12)

Pallen, Mark J

2023

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The status Candidatus for uncultured taxa of Bacteria and Archaea : SWOT analysis

International journal of systematic and evolutionary microbiology, 2021-09, Vol.71 (9)

Pallen, Mark J

2021

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Formation of prokaryote names from personal names: a review of current practice and a proposal to emend Appendix 9 of the International Code of Nomenclature of Prokaryotes

International journal of systematic and evolutionary microbiology, 2024-01, Vol.74 (1)

Pallen, Mark J

2024

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Request for an Opinion on the standing and retention of Firmicutes as a phylum name

International journal of systematic and evolutionary microbiology, 2023-07, Vol.73 (7)

Pallen, Mark J

2023

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An Extensive Repertoire of Type III Secretion Effectors in Escherichia coli O157 and the Role of Lambdoid Phages in Their Dissemination

Proceedings of the National Academy of Sciences - PNAS, 2006-10, Vol.103 (40), p.14941-14946

2006

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The microbial ecology of Escherichia coli in the vertebrate gut

FEMS microbiology reviews, 2022-05, Vol.46 (3), p.1

2022

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Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains

BMC microbiology, 2009-12, Vol.9 (1), p.252-252

2009

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Twenty years of bacterial genome sequencing

Assembly of hundreds of novel bacterial genomes from the chicken caecum

Extensive microbial and functional diversity within the chicken cecal microbiome

Performance comparison of benchtop high-throughput sequencing platforms

The Enigmatic Esx Proteins: Looking Beyond Mycobacteria

The Next Million Names for Archaea and Bacteria

Identification of novel imidazo[1,2-a]pyridine inhibitors targeting M. tuberculosis QcrB

High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity

Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure

Defining bacterial species in the genomic era: insights from the genus Acinetobacter

Extensive microbial diversity within the chicken gut microbiome revealed by metagenomics and culture

High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature

High-throughput sequencing and clinical microbiology: progress, opportunities and challenges

The ESAT-6/WXG100 superfamily – and a new Gram-positive secretion system?

The dynamic history of prokaryotic phyla: discovery, diversity and division

Metagenomic profiling of ticks: Identification of novel rickettsial genomes and detection of tick-borne canine parvovirus

Valid publication of names for bacterial species from the chicken gut

Use of connecting vowels after stems ending in the same vowel: a proposal to emend Appendix 9 of the International Code of Nomenclature of Prokaryotes

The status Candidatus for uncultured taxa of Bacteria and Archaea : SWOT analysis

Formation of prokaryote names from personal names: a review of current practice and a proposal to emend Appendix 9 of the International Code of Nomenclature of Prokaryotes

Request for an Opinion on the standing and retention of Firmicutes as a phylum name

An Extensive Repertoire of Type III Secretion Effectors in Escherichia coli O157 and the Role of Lambdoid Phages in Their Dissemination

The microbial ecology of Escherichia coli in the vertebrate gut

Gene doctoring: a method for recombineering in laboratory and pathogenic Escherichia coli strains

Tetrahydropyrazolo[1,5-a]pyrimidine-3-carboxamide and N-benzyl-6',7'-dihydrospiro[piperidine-4,4'-thieno[3,2-c]pyran] analogues with bactericidal efficacy against Mycobacterium tuberculosis targeting MmpL3

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