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In the fast lane: Large-scale bacterial genome engineering

Journal of biotechnology, 2012-07, Vol.160 (1-2), p.72-79

2012

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Exploring the fitness benefits of genome reduction in Escherichia coli by a selection-driven approach

Scientific reports, 2020-04, Vol.10 (1), p.7345, Article 7345

2020

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The Complete Genome Sequence of Escherichia coli DH10B: Insights into the Biology of a Laboratory Workhorse

Journal of Bacteriology, 2008-04, Vol.190 (7), p.2597-2606

2008

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A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species

Proceedings of the National Academy of Sciences - PNAS, 2016-03, Vol.113 (9), p.2502-2507

2016

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Bacterial evolution of antibiotic hypersensitivity

Molecular systems biology, 2013, Vol.9 (1), p.700-n/a

2013

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The dawn of evolutionary genome engineering

Nature reviews. Genetics, 2014-07, Vol.15 (7), p.504-512

2014

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Emergent Properties of Reduced-Genome Escherichia coli

Science (American Association for the Advancement of Science), 2006-05, Vol.312 (5776), p.1044-1046

2006

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Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications

Microbial cell factories, 2010-05, Vol.9 (1), p.38-38, Article 38

2010

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Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs

Microbial cell factories, 2012-01, Vol.11 (1), p.11-11, Article 11

2012

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Indispensability of Horizontally Transferred Genes and Its Impact on Bacterial Genome Streamlining

Molecular biology and evolution, 2016-05, Vol.33 (5), p.1257-1269

2016

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System-level genome editing in microbes

Current opinion in microbiology, 2016-10, Vol.33, p.113-122

2016

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Engineered ribosomal RNA operon copy-number variants of E. coli reveal the evolutionary trade-offs shaping rRNA operon number

Nucleic acids research, 2015-02, Vol.43 (3), p.1783-1794

2015

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Genome-Wide Abolishment of Mobile Genetic Elements Using Genome Shuffling and CRISPR/Cas-Assisted MAGE Allows the Efficient Stabilization of a Bacterial Chassis

ACS synthetic biology, 2017-08, Vol.6 (8), p.1471-1483

2017

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Conditional DNA repair mutants enable highly precise genome engineering

Nucleic acids research, 2014-04, Vol.42 (8), p.e62-e62

2014

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

Nature (London), 2001-01, Vol.409 (6819), p.529-533

2001

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Engineering a reduced Escherichia coli genome

Genome research, 2002-04, Vol.12 (4), p.640-647

2002

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Systematic Genome Reductions: Theoretical and Experimental Approaches

Chemical reviews, 2007-08, Vol.107 (8), p.3498-3513

2007

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Competition between transposable elements and mutator genes in bacteria

Molecular biology and evolution, 2012-10, Vol.29 (10), p.3153-3159

2012

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Molecular Evolution of a Pathogenicity Island from Enterohemorrhagic Escherichia coli O157:H7

Infection and Immunity, 1998-08, Vol.66 (8), p.3810-3817

1998

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Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome

Nucleic acids research, 1999-11, Vol.27 (22), p.4409-4415

1999

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Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome

Journal of Bacteriology, 1997-07, Vol.179 (13), p.4426-4428

1997

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Urease of Enterohemorrhagic Escherichia coli: Evidence for Regulation by Fur and a trans-Acting Factor

Infection and Immunity, 2002-02, Vol.70 (2), p.1027-1031

2002

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Predictive motifs derived from cytosine methyltransferases

Nucleic acids research, 1989, Vol.17 (7), p.2421-2435

1989

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Enhancing the Translational Capacity of E. coli by Resolving the Codon Bias

ACS synthetic biology, 2018-11, Vol.7 (11), p.2656-2664

2018

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Bacteriophage recombineering in the lytic state using the lambda red recombinases

Microbial biotechnology, 2012-07, Vol.5 (4), p.466-476

2012

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In the fast lane: Large-scale bacterial genome engineering

Exploring the fitness benefits of genome reduction in Escherichia coli by a selection-driven approach

The Complete Genome Sequence of Escherichia coli DH10B: Insights into the Biology of a Laboratory Workhorse

A highly precise and portable genome engineering method allows comparison of mutational effects across bacterial species

Bacterial evolution of antibiotic hypersensitivity

The dawn of evolutionary genome engineering

Emergent Properties of Reduced-Genome Escherichia coli

Reduced evolvability of Escherichia coli MDS42, an IS-less cellular chassis for molecular and synthetic biology applications

Low-mutation-rate, reduced-genome Escherichia coli: an improved host for faithful maintenance of engineered genetic constructs

Indispensability of Horizontally Transferred Genes and Its Impact on Bacterial Genome Streamlining

System-level genome editing in microbes

Engineered ribosomal RNA operon copy-number variants of E. coli reveal the evolutionary trade-offs shaping rRNA operon number

Genome-Wide Abolishment of Mobile Genetic Elements Using Genome Shuffling and CRISPR/Cas-Assisted MAGE Allows the Efficient Stabilization of a Bacterial Chassis

Conditional DNA repair mutants enable highly precise genome engineering

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

Engineering a reduced Escherichia coli genome

Systematic Genome Reductions: Theoretical and Experimental Approaches

Competition between transposable elements and mutator genes in bacteria

Molecular Evolution of a Pathogenicity Island from Enterohemorrhagic Escherichia coli O157:H7

Markerless gene replacement in Escherichia coli stimulated by a double-strand break in the chromosome

Versatile insertion plasmids for targeted genome manipulations in bacteria: isolation, deletion, and rescue of the pathogenicity island LEE of the Escherichia coli O157:H7 genome

Urease of Enterohemorrhagic Escherichia coli: Evidence for Regulation by Fur and a trans-Acting Factor

Predictive motifs derived from cytosine methyltransferases

Enhancing the Translational Capacity of E. coli by Resolving the Codon Bias

Bacteriophage recombineering in the lytic state using the lambda red recombinases

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