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Predictors of Chemosensitivity in Triple Negative Breast Cancer: An Integrated Genomic Analysis

PLoS medicine, 2016-12, Vol.13 (12), p.e1002193-e1002193

2016

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Predicting drug response of small cell lung cancer cell lines based on enrichment analysis of complex gene signatures

Journal of biotechnology, 2024-03, Vol.383, p.86-93

2024

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Currently favored sampling practices for tumor sequencing can produce optimal results in the clinical setting

Scientific reports, 2020-09, Vol.10 (1), p.14403-14403, Article 14403

2020

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Convergence of SIRT1 and ATR signaling to modulate replication origin dormancy

Nucleic acids research, 2022-05, Vol.50 (9), p.5111-5128

2022

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The RepID–CRL4 ubiquitin ligase complex regulates metaphase to anaphase transition via BUB3 degradation

Nature communications, 2020-01, Vol.11 (1), p.24-24, Article 24

2020

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The efficiency of multi-target drugs: the network approach might help drug design

Trends in pharmacological sciences (Regular ed.), 2005-04, Vol.26 (4), p.178-182

2005

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Dynamics of replication origin over-activation

Nature communications, 2021-06, Vol.12 (1), p.3448-15, Article 3448

2021

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Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification

PloS one, 2014-07, Vol.9 (7), p.e103441-e103441

2014

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Applied models and molecular characteristics of small cell lung cancer

Pathology oncology research, 2024-04, Vol.30, p.1611743-1611743

2024

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Exploring the Significance of the Exon 4-Skipping Isoform of the ZNF217 Oncogene in Breast Cancer

Frontiers in oncology, 2021-07, Vol.11, p.647269-647269

2021

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ROC analysis: applications to the classification of biological sequences and 3D structures

Briefings in bioinformatics, 2008-05, Vol.9 (3), p.198-209

2008

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TP53 mutation hits energy metabolism and increases glycolysis in breast cancer

Oncotarget, 2016-10, Vol.7 (41), p.67183-67195

2016

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BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

Epigenetics & chromatin, 2020-04, Vol.13 (1), p.21-21, Article 21

2020

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HeurAA: accurate and fast detection of genetic variations with a novel heuristic amplicon aligner program for next generation sequencing

PloS one, 2013-01, Vol.8 (1), p.e54294

2013

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SIRT1 Prevents R-Loops during Chronological Aging by Modulating DNA Replication at rDNA Loci

Cells (Basel, Switzerland), 2023-11, Vol.12 (22), p.2630

2023

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Vicinal disulfide turns

Protein engineering, 2003-09, Vol.16 (9), p.637-639

2003

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Wanted DEAD/H or Alive: Helicases Winding Up in Cancers

JNCI : Journal of the National Cancer Institute, 2017-01, Vol.109 (6), p.djw278

2017

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Integrative epigenomic analyses of small cell lung cancer cells demonstrates the clinical translational relevance of gene body methylation

iScience, 2022-11, Vol.25 (11), p.105338, Article 105338

2022

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CDK-independent role of D-type cyclins in regulating DNA mismatch repair

Molecular cell, 2024-04, Vol.84 (7), p.1224-1242.e13

2024

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Genome-Wide Analysis Unveils DNA Helicase RECQ1 as a Regulator of Estrogen Response Pathway in Breast Cancer Cells

Molecular and cellular biology, 2021-04, Vol.41 (4)

2021

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Sequence‐dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides

The EMBO journal, 1995-04, Vol.14 (8), p.1812-1818

1995

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A Protein Classification Benchmark collection for machine learning

Nucleic acids research, 2007-01, Vol.35 (Database issue), p.D232-D236

2007

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Nuclear architecture dictates HIV-1 integration site selection

Nature (London), 2015-05, Vol.521 (7551), p.227-231

2015

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ProGMap: an integrated annotation resource for protein orthology

Nucleic acids research, 2009-07, Vol.37 (Web Server issue), p.W428-W434

2009

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Obituary: In memory of Jack Leunissen

Briefings in bioinformatics, 2013-05, Vol.14 (3), p.261-262

2013

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Predictors of Chemosensitivity in Triple Negative Breast Cancer: An Integrated Genomic Analysis

Predicting drug response of small cell lung cancer cell lines based on enrichment analysis of complex gene signatures

Currently favored sampling practices for tumor sequencing can produce optimal results in the clinical setting

Convergence of SIRT1 and ATR signaling to modulate replication origin dormancy

The RepID–CRL4 ubiquitin ligase complex regulates metaphase to anaphase transition via BUB3 degradation

The efficiency of multi-target drugs: the network approach might help drug design

Dynamics of replication origin over-activation

Fast and sensitive alignment of microbial whole genome sequencing reads to large sequence datasets on a desktop PC: application to metagenomic datasets and pathogen identification

Applied models and molecular characteristics of small cell lung cancer

Exploring the Significance of the Exon 4-Skipping Isoform of the ZNF217 Oncogene in Breast Cancer

ROC analysis: applications to the classification of biological sequences and 3D structures

TP53 mutation hits energy metabolism and increases glycolysis in breast cancer

BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

HeurAA: accurate and fast detection of genetic variations with a novel heuristic amplicon aligner program for next generation sequencing

SIRT1 Prevents R-Loops during Chronological Aging by Modulating DNA Replication at rDNA Loci

Vicinal disulfide turns

Wanted DEAD/H or Alive: Helicases Winding Up in Cancers

Integrative epigenomic analyses of small cell lung cancer cells demonstrates the clinical translational relevance of gene body methylation

CDK-independent role of D-type cyclins in regulating DNA mismatch repair

Genome-Wide Analysis Unveils DNA Helicase RECQ1 as a Regulator of Estrogen Response Pathway in Breast Cancer Cells

Sequence‐dependent bending propensity of DNA as revealed by DNase I: parameters for trinucleotides

A Protein Classification Benchmark collection for machine learning

Nuclear architecture dictates HIV-1 integration site selection

ProGMap: an integrated annotation resource for protein orthology

Obituary: In memory of Jack Leunissen

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