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ATP-Driven Separation of Liquid Phase Condensates in Bacteria

Molecular cell, 2020-07, Vol.79 (2), p.293-303.e4

2020

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Totally asymmetric simple exclusion process on networks

Physical review letters, 2011-08, Vol.107 (6), p.068702-068702, Article 068702

2011

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Exclusion processes on networks as models for cytoskeletal transport

New journal of physics, 2013-08, Vol.15 (8), p.85005-54

2013

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Variable combinations of specific ephrin ligand/Eph receptor pairs control embryonic tissue separation

PLoS biology, 2014-09, Vol.12 (9), p.e1001955-e1001955

2014

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Physical modeling of ribosomes along messenger RNA: Estimating kinetic parameters from ribosome profiling experiments using a ballistic model

PLoS computational biology, 2023-10, Vol.19 (10), p.e1011522-e1011522

2023

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Modeling and live imaging of mechanical instabilities in the zebrafish aorta during hematopoiesis

Scientific reports, 2021-04, Vol.11 (1), p.9316-9316, Article 9316

2021

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Macrophage morphological plasticity and migration is Rac signalling and MMP9 dependant

Scientific reports, 2021-05, Vol.11 (1), p.10123-10123, Article 10123

2021

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Author Correction: Modeling and live imaging of mechanical instabilities in the zebrafish aorta during hematopoiesis

Scientific reports, 2021-08, Vol.11 (1), p.16332-16332, Article 16332

2021

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Supercoiled DNA and non-equilibrium formation of protein complexes: A quantitative model of the nucleoprotein ParBS partition complex

PLoS computational biology, 2021-04, Vol.17 (4), p.e1008869-e1008869

2021

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Stochastic Self-Assembly of ParB Proteins Builds the Bacterial DNA Segregation Apparatus

Cell systems, 2015-08, Vol.1 (2), p.163-173

2015

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Looping and clustering model for the organization of protein-DNA complexes on the bacterial genome

New journal of physics, 2018-03, Vol.20 (3), p.35002

2018

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Motor protein traffic regulation by supply-demand balance of resources

Physical biology, 2014-09, Vol.11 (5), p.056006-056006

2014

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Physical Modeling of a Sliding Clamp Mechanism for the Spreading of ParB at Short Genomic Distance from Bacterial Centromere Sites

iScience, 2020-12, Vol.23 (12), p.101861-101861, Article 101861

2020

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Structural Basis of the Action of Pulvomycin and GE2270 A on Elongation Factor Tu

Biochemistry (Easton), 2006-06, Vol.45 (22), p.6846-6857

2006

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Modeling cytoskeletal traffic: an interplay between passive diffusion and active transport

Physical review letters, 2013-02, Vol.110 (9), p.098102-098102, Article 098102

2013

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Enacyloxin IIa Pinpoints a Binding Pocket of Elongation Factor Tu for Development of Novel Antibiotics

The Journal of biological chemistry, 2006-02, Vol.281 (5), p.2893-2900

2006

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Elongation factor Tu-targeted antibiotics: Four different structures, two mechanisms of action

FEBS letters, 2006-08, Vol.580 (19), p.4576-4581

2006

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Stochastic modelling of collective motor protein transport through a crossing of microtubules

Journal of theoretical biology, 2020-11, Vol.505, p.110370-110370, Article 110370

2020

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Surfing on Protein Waves: Proteophoresis as a Mechanism for Bacterial Genome Partitioning

Physical review letters, 2017-07, Vol.119 (2), p.028101-028101, Article 028101

2017

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Understanding totally asymmetric simple-exclusion-process transport on networks: generic analysis via effective rates and explicit vertices

Physical review. E, Statistical, nonlinear, and soft matter physics, 2009-10, Vol.80 (4 Pt 1), p.041128-041128, Article 041128

2009

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Physical modeling of ribosomes along messenger RNA: estimating kinetic rates from ribosome profiling experiments with a ballistic model

PLoS computational biology, 2023-10, Vol.19 (10)

2023

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Modelling the effect of ribosome mobility on the rate of protein synthesis (vol 44, 19, 2021)

The European physical journal. E, Soft matter and biological physics, 2021-04, Vol.44 (4)

2021

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Stator dynamics of the bacterial flagellar motor

Biophysical journal, 2022-02, Vol.121 (3), p.2a-2a

2022

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Supercoiled DNA and non-equilibrium formation of protein complexes: A quantitative model of the nucleoprotein ParB S partition complex

PLoS computational biology, 2021-04, Vol.17 (4), p.e1008869

2021

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Role of network junctions for the totally asymmetric simple exclusion process

European physical education review, 2013-10, Vol.88 (4), p.042104-042104, Article 042104

2013

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ATP-Driven Separation of Liquid Phase Condensates in Bacteria

Totally asymmetric simple exclusion process on networks

Exclusion processes on networks as models for cytoskeletal transport

Variable combinations of specific ephrin ligand/Eph receptor pairs control embryonic tissue separation

Physical modeling of ribosomes along messenger RNA: Estimating kinetic parameters from ribosome profiling experiments using a ballistic model

Modeling and live imaging of mechanical instabilities in the zebrafish aorta during hematopoiesis

Macrophage morphological plasticity and migration is Rac signalling and MMP9 dependant

Author Correction: Modeling and live imaging of mechanical instabilities in the zebrafish aorta during hematopoiesis

Supercoiled DNA and non-equilibrium formation of protein complexes: A quantitative model of the nucleoprotein ParBS partition complex

Stochastic Self-Assembly of ParB Proteins Builds the Bacterial DNA Segregation Apparatus

Looping and clustering model for the organization of protein-DNA complexes on the bacterial genome

Motor protein traffic regulation by supply-demand balance of resources

Physical Modeling of a Sliding Clamp Mechanism for the Spreading of ParB at Short Genomic Distance from Bacterial Centromere Sites

Structural Basis of the Action of Pulvomycin and GE2270 A on Elongation Factor Tu

Modeling cytoskeletal traffic: an interplay between passive diffusion and active transport

Enacyloxin IIa Pinpoints a Binding Pocket of Elongation Factor Tu for Development of Novel Antibiotics

Elongation factor Tu-targeted antibiotics: Four different structures, two mechanisms of action

Stochastic modelling of collective motor protein transport through a crossing of microtubules

Surfing on Protein Waves: Proteophoresis as a Mechanism for Bacterial Genome Partitioning

Understanding totally asymmetric simple-exclusion-process transport on networks: generic analysis via effective rates and explicit vertices

Physical modeling of ribosomes along messenger RNA: estimating kinetic rates from ribosome profiling experiments with a ballistic model

Modelling the effect of ribosome mobility on the rate of protein synthesis (vol 44, 19, 2021)

Stator dynamics of the bacterial flagellar motor

Supercoiled DNA and non-equilibrium formation of protein complexes: A quantitative model of the nucleoprotein ParB S partition complex

Role of network junctions for the totally asymmetric simple exclusion process

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