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Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

Scientific reports, 2024-05, Vol.14 (1), p.10967-9, Article 10967

2024

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Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris)

BMC genomics, 2021-10, Vol.22 (1), p.711-711, Article 711

2021

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spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics

Bioinformatics (Oxford, England), 2022-04, Vol.38 (9), p.2645-2647

2022

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Reduced Diversity in the Bacteriome of the Phytophagous Mite Brevipalpus yothersi (Acari: Tenuipalpidae)

Insects (Basel, Switzerland), 2016-12, Vol.7 (4), p.80-80

2016

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spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data

Bioinformatics, 2021-12, Vol.37 (23), p.4584-4586

2021

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Hierarchical Hybrid Enrichment: Multitiered Genomic Data Collection Across Evolutionary Scales, With Application to Chorus Frogs (Pseudacris)

Systematic biology, 2020-07, Vol.69 (4), p.756-773

2020

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Challenges and Opportunities in the Statistical Analysis of Multiplex Immunofluorescence Data

Cancers, 2021-06, Vol.13 (12), p.3031

2021

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A likelihood inference of historical biogeography in the world’s most diverse terrestrial vertebrate genus: Diversification of direct-developing frogs (Craugastoridae: Pristimantis) across the Neotropics

Molecular phylogenetics and evolution, 2015-04, Vol.85, p.50-58

2015

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The herpetological contributions of Richard Thomas

Anatomical record (Hoboken, N.J. : 2007), 2021-10, Vol.304 (10), p.2095-2109

2021

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The status of the anomalepidid snake Liotyphlops albirostris and the revalidation of three taxa based on morphology and ecological niche models

Anatomical record (Hoboken, N.J. : 2007), 2021-10, Vol.304 (10), p.2264-2278

2021

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Variable response of anuran calling activity to daily precipitation and temperature: implications for climate change

Ecosphere (Washington, D.C), 2013-04, Vol.4 (4), p.art47-12

2013

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A biographical account of John Paul Richard Thomas, the man who leaves no stone unturned

Anatomical record (Hoboken, N.J. : 2007), 2021-10, Vol.304 (10), p.2085-2094

2021

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Spatial transcriptomics analysis identifies a tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease

Cell reports. Medicine, 2024-06, Vol.5 (6), p.101606, Article 101606

2024

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Elevated levels of adaption in Helicobacter pylori genomes from Japan; a link to higher incidences of gastric cancer?

Evolution, medicine, and public health, 2015-03, Vol.2015 (1), p.88-105

2015

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Hidden Diversity in the Mountain Chorus Frog (Pseudacris brachyphona) and the Diagnosis of a New Species of Chorus Frog in the Southeastern United States

Copeia, 2020-12, Vol.108 (4)

2020

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Abstract 277: High agreement between immune profiling assays on the detection of infiltrating immune cells in ovarian tumor tissue

Cancer research (Chicago, Ill.), 2022-06, Vol.82 (12_Supplement), p.277-277

2022

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Abstract 3928: Genomic landscape and estimation of immune infiltration of soft tissue sarcoma histology subtypes from the ORIEN network

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.3928-3928

2024

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Abstract 1163: Increased spatial coupling of integrin and collagen IV in the immunoresistant clear cell renal cell carcinoma tumor microenvironment

Cancer research (Chicago, Ill.), 2024-03, Vol.84 (6_Supplement), p.1163-1163

2024

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An Integrative Approach to the Evolution in Populations of a Fossorial Reptile - Population Genetics, Morphometrics, and Habitat Modelling of the Puerto Rican Worm Lizard, Amphisbaena caeca Cuvier (Reptilia: Amphisbaenidae)

Ospina, Oscar E

2018

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Evaluación piloto de una escala de clasificación audiométrica de HNIR, aplicable a los programas de vigilancia epidemiológica

Revista Colombiana de salud ocupacional, 2013-12, Vol.3 (4)

2013

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Escalas de clasificación audiométrica en vigilancia epidemiológica de trabajadores expuestos a ruido en Colombia

Revista Colombiana de salud ocupacional, 2013-09, Vol.3 (3)

2013

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Evaluación piloto de una escala de clasificación audiométrica de HNIR, aplicable a los programas de vigilancia epidemiológica

Revista Colombiana de Salud Ocupacional, 2013, Vol.3 (4), p.12-15

2013

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Mycobiome of Brevipalpus Mite Strains and Insights on Metabolic Function in the Bacteriome of the Tetranychoidea Mites

Contemporary Acarology, 2019, p.79-91

2019

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Haralick textural features on T 2 -weighted MRI are associated with biochemical recurrence following radiotherapy for peripheral zone prostate cancer

Journal of magnetic resonance imaging, 2017-01, Vol.45 (1), p.103

2017

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Differential gene expression analysis of spatial transcriptomic experiments using spatial mixed models

Neurogenomic divergence during speciation by reinforcement of mating behaviors in chorus frogs (Pseudacris)

spatialGE: quantification and visualization of the tumor microenvironment heterogeneity using spatial transcriptomics

Reduced Diversity in the Bacteriome of the Phytophagous Mite Brevipalpus yothersi (Acari: Tenuipalpidae)

spatialTIME and iTIME: R package and Shiny application for visualization and analysis of immunofluorescence data

Hierarchical Hybrid Enrichment: Multitiered Genomic Data Collection Across Evolutionary Scales, With Application to Chorus Frogs (Pseudacris)

Challenges and Opportunities in the Statistical Analysis of Multiplex Immunofluorescence Data

A likelihood inference of historical biogeography in the world’s most diverse terrestrial vertebrate genus: Diversification of direct-developing frogs (Craugastoridae: Pristimantis) across the Neotropics

The herpetological contributions of Richard Thomas

Preexisting Skin-Resident CD8 and γδ T-cell Circuits Mediate Immune Response in Merkel Cell Carcinoma and Predict Immunotherapy Efficacy

The status of the anomalepidid snake Liotyphlops albirostris and the revalidation of three taxa based on morphology and ecological niche models

Variable response of anuran calling activity to daily precipitation and temperature: implications for climate change

A biographical account of John Paul Richard Thomas, the man who leaves no stone unturned

Spatial transcriptomics analysis identifies a tumor-promoting function of the meningeal stroma in melanoma leptomeningeal disease

Elevated levels of adaption in Helicobacter pylori genomes from Japan; a link to higher incidences of gastric cancer?

Hidden Diversity in the Mountain Chorus Frog (Pseudacris brachyphona) and the Diagnosis of a New Species of Chorus Frog in the Southeastern United States

Abstract 277: High agreement between immune profiling assays on the detection of infiltrating immune cells in ovarian tumor tissue

Abstract 3928: Genomic landscape and estimation of immune infiltration of soft tissue sarcoma histology subtypes from the ORIEN network

Abstract 1163: Increased spatial coupling of integrin and collagen IV in the immunoresistant clear cell renal cell carcinoma tumor microenvironment

An Integrative Approach to the Evolution in Populations of a Fossorial Reptile - Population Genetics, Morphometrics, and Habitat Modelling of the Puerto Rican Worm Lizard, Amphisbaena caeca Cuvier (Reptilia: Amphisbaenidae)

Evaluación piloto de una escala de clasificación audiométrica de HNIR, aplicable a los programas de vigilancia epidemiológica

Escalas de clasificación audiométrica en vigilancia epidemiológica de trabajadores expuestos a ruido en Colombia

Evaluación piloto de una escala de clasificación audiométrica de HNIR, aplicable a los programas de vigilancia epidemiológica

Mycobiome of Brevipalpus Mite Strains and Insights on Metabolic Function in the Bacteriome of the Tetranychoidea Mites

Haralick textural features on T 2 -weighted MRI are associated with biochemical recurrence following radiotherapy for peripheral zone prostate cancer

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