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Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Cell, 2013-04, Vol.153 (2), p.307-319

2013

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Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers

Cell, 2013-04, Vol.153 (2), p.320-334

2013

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Revisiting Global Gene Expression Analysis

Cell, 2012-10, Vol.151 (3), p.476-482

2012

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Master Transcription Factors Determine Cell-Type-Specific Responses to TGF-β Signaling

Cell, 2011-10, Vol.147 (3), p.565-576

2011

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Quantitative ChIP-Seq Normalization Reveals Global Modulation of the Epigenome

Cell reports (Cambridge), 2014-11, Vol.9 (3), p.1163-1170

2014

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Enhancer decommissioning by LSD1 during embryonic stem cell differentiation

Nature (London), 2012-02, Vol.482 (7384), p.221-225

2012

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Global Transcriptional and Translational Repression in Human-Embryonic-Stem-Cell-Derived Rett Syndrome Neurons

Cell stem cell, 2013-10, Vol.13 (4), p.446-458

2013

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Mediator and cohesin connect gene expression and chromatin architecture

Nature (London), 2010-09, Vol.467 (7314), p.430-435

2010

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Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

Proceedings of the National Academy of Sciences - PNAS, 2013-02, Vol.110 (8), p.2876-2881

2013

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Discovery and Characterization of SY-1365, a Selective, Covalent Inhibitor of CDK7

Cancer research (Chicago, Ill.), 2019-07, Vol.79 (13), p.3479-3491

2019

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The histone methyltransferase SETDB1 is recurrently amplified in melanoma and accelerates its onset

Nature (London), 2011-03, Vol.471 (7339), p.513-517

2011

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High-Resolution Root Spatiotemporal Map Reveals Dominant Expression Patterns

Science (American Association for the Advancement of Science), 2007-11, Vol.318 (5851), p.801-806

2007

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Multiple Structural Maintenance of Chromosome Complexes at Transcriptional Regulatory Elements

Stem cell reports, 2013-11, Vol.1 (5), p.371-378

2013

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Cyclin-Dependent Kinases Are Regulators and Effectors of Oscillations Driven by a Transcription Factor Network

Molecular cell, 2012-03, Vol.45 (5), p.669-679

2012

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Global control of cell-cycle transcription by coupled CDK and network oscillators

Nature, 2008-06, Vol.453 (7197), p.944-947

2008

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Protonophore‐ and pH‐insensitive glucose and sucrose accumulation detected by FRET nanosensors in Arabidopsis root tips

The Plant journal : for cell and molecular biology, 2008-12, Vol.56 (6), p.948-962

2008

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Branching process deconvolution algorithm reveals a detailed cell-cycle transcription program

Proceedings of the National Academy of Sciences - PNAS, 2013-03, Vol.110 (10), p.E968-E977

2013

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Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

Cancer discovery, 2017-10, Vol.7 (10), p.1136-1153

2017

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Manipulating large-scale Arabidopsis microarray expression data: identifying dominant expression patterns and biological process enrichment

Methods in molecular biology (Clifton, N.J.), 2009, Vol.553, p.57

2009

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Detecting separate time scales in genetic expression data

BMC genomics, 2010-06, Vol.11 (1), p.381-381, Article 381

2010

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Molecular dissection of the checkpoint kinase Hsl1p

Molecular biology of the cell, 2009-04, Vol.20 (7), p.1926-1936

2009

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Alignment of Synchronized Time-Series Data Using the Characterizing Loss of Cell Cycle Synchrony Model for Cross-Experiment Comparisons

Journal of visualized experiments, 2023-06 (196)

2023

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CpG island structure and trithorax/polycomb chromatin domains in human cells

Genomics (San Diego, Calif.), 2012-11, Vol.100 (5), p.320-326

2012

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Author Correction: Enhancer decommissioning by LSD1 during embryonic stem cell differentiation

Nature (London), 2018-10, Vol.562 (7728), p.E24-E24

2018

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Reconstructing spatiotemporal gene expression data from partial observations

Bioinformatics, 2009-10, Vol.25 (19), p.2581-2587

2009

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Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Selective Inhibition of Tumor Oncogenes by Disruption of Super-Enhancers

Revisiting Global Gene Expression Analysis

Master Transcription Factors Determine Cell-Type-Specific Responses to TGF-β Signaling

Quantitative ChIP-Seq Normalization Reveals Global Modulation of the Epigenome

Enhancer decommissioning by LSD1 during embryonic stem cell differentiation

Global Transcriptional and Translational Repression in Human-Embryonic-Stem-Cell-Derived Rett Syndrome Neurons

Mediator and cohesin connect gene expression and chromatin architecture

Divergent transcription of long noncoding RNA/mRNA gene pairs in embryonic stem cells

Discovery and Characterization of SY-1365, a Selective, Covalent Inhibitor of CDK7

The histone methyltransferase SETDB1 is recurrently amplified in melanoma and accelerates its onset

High-Resolution Root Spatiotemporal Map Reveals Dominant Expression Patterns

Multiple Structural Maintenance of Chromosome Complexes at Transcriptional Regulatory Elements

Cyclin-Dependent Kinases Are Regulators and Effectors of Oscillations Driven by a Transcription Factor Network

Global control of cell-cycle transcription by coupled CDK and network oscillators

Protonophore‐ and pH‐insensitive glucose and sucrose accumulation detected by FRET nanosensors in Arabidopsis root tips

Branching process deconvolution algorithm reveals a detailed cell-cycle transcription program

Superenhancer Analysis Defines Novel Epigenomic Subtypes of Non-APL AML, Including an RARα Dependency Targetable by SY-1425, a Potent and Selective RARα Agonist

Manipulating large-scale Arabidopsis microarray expression data: identifying dominant expression patterns and biological process enrichment

Detecting separate time scales in genetic expression data

Molecular dissection of the checkpoint kinase Hsl1p

Alignment of Synchronized Time-Series Data Using the Characterizing Loss of Cell Cycle Synchrony Model for Cross-Experiment Comparisons

CpG island structure and trithorax/polycomb chromatin domains in human cells

Author Correction: Enhancer decommissioning by LSD1 during embryonic stem cell differentiation

Reconstructing spatiotemporal gene expression data from partial observations

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