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ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data

Nucleic acids research, 2022-07, Vol.50 (W1), p.W175

2022

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Lipase/Oxovanadium Co-Catalyzed Dynamic Kinetic Resolution of Propargyl Alcohols: Competition between Racemization and Rearrangement

Organic letters, 2019-05, Vol.21 (9), p.2978-2982

2019

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Epigenetic landscape of drug responses revealed through large-scale ChIP-seq data analyses

BMC bioinformatics, 2022-01, Vol.23 (1), p.51-51, Article 51

2022

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Epiblast ground state is controlled by canonical Wnt/β-catenin signaling in the postimplantation mouse embryo and epiblast stem cells

PloS one, 2013-05, Vol.8 (5), p.e63378

2013

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High-depth spatial transcriptome analysis by photo-isolation chemistry

Nature communications, 2021-07, Vol.12 (1), p.4416-4416, Article 4416

2021

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TRANSDIRE: data-driven direct reprogramming by a pioneer factor-guided trans-omics approach

Bioinformatics, 2022-05, Vol.38 (10), p.2839-2846

2022

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FTO Demethylates Cyclin D1 mRNA and Controls Cell-Cycle Progression

Cell reports (Cambridge), 2020-04, Vol.31 (1), p.107464-107464, Article 107464

2020

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Paternal age affects offspring via an epigenetic mechanism involving REST/NRSF

EMBO reports, 2021-02, Vol.22 (2), p.e51524-n/a

2021

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A defined glycosylation regulatory network modulates total glycome dynamics during pluripotency state transition

Scientific reports, 2021-01, Vol.11 (1), p.1276-1276, Article 1276

2021

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ChIP-seq analysis of genomic binding regions of five major transcription factors highlights a central role for ZIC2 in the mouse epiblast stem cell gene regulatory network

Development (Cambridge), 2017-06, Vol.144 (11), p.1948-1958

2017

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Effect of murine double‐minute 2 inhibitors in preclinical models of advanced clear cell carcinomas originating from ovaries and kidneys

Cancer science, 2020-10, Vol.111 (10), p.3824-3834

2020

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A novel role of helix‐loop‐helix transcriptional factor Bhlhe40 in osteoclast activation

Journal of cellular physiology, 2022-10, Vol.237 (10), p.3912-3926

2022

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DDBJ Data Analysis Challenge: a machine learning competition to predict Arabidopsis chromatin feature annotations from DNA sequences

Genes & Genetic Systems, 2020/02/01, Vol.95(1), pp.43-50

2020

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Detection of REST expression in the testis using epitope‐tag knock‐in mice generated by genome editing

Developmental dynamics, 2022-03, Vol.251 (3), p.525-535

2022

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Chd2 regulates chromatin for proper gene expression toward differentiation in mouse embryonic stem cells

Nucleic acids research, 2017-09, Vol.45 (15), p.8758

2017

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Wnt signaling regulates left–right axis formation in the node of mouse embryos

Developmental biology, 2013-08, Vol.380 (2), p.222-232

2013

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Prognostic outcome of cervical laser ablation using a holmium yttrium-aluminum-garnet (Ho:YAG) laser for the treatment of cervical intraepithelial neoplasia: A single-center retrospective study

Gynecologic oncology reports, 2024-06, Vol.53, p.101405-101405, Article 101405

2024

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SraTailor: Graphical user interface software for processing and visualizing ChIP‐seq data

Genes to cells : devoted to molecular & cellular mechanisms, 2014-12, Vol.19 (12), p.919-926

2014

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Elucidating disease-associated mechanisms triggered by pollutants via the epigenetic landscape using large-scale ChIP-Seq data

Epigenetics & chromatin, 2023-09, Vol.16 (1), p.1-34, Article 34

2023

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Argininosuccinate Synthase 1-Deficiency Enhances the Cell Sensitivity to Arginine through Decreased DEPTOR Expression in Endometrial Cancer

Scientific reports, 2017-03, Vol.7 (1), p.45504-45504, Article 45504

2017

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Hyperglycemia impairs left–right axis formation and thereby disturbs heart morphogenesis in mouse embryos

Proceedings of the National Academy of Sciences - PNAS, 2015-09, Vol.112 (38), p.E5300-E5307

2015

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Regulome-based characterization of drug activity across the human diseasome

NPJ systems biology and applications, 2022-11, Vol.8 (1), p.44-44, Article 44

2022

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Cis‐control of Six1 expression in neural crest cells during craniofacial development

Developmental dynamics, 2019-12, Vol.248 (12), p.1264-1272

2019

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Significance of survivin as a prognostic factor and a therapeutic target in endometrial cancer

Gynecologic oncology, 2016-06, Vol.141 (3), p.564-569

2016

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Anti-Tumor Effect of Inhibition of DNA Damage Response Proteins, ATM and ATR, in Endometrial Cancer Cells

Cancers, 2019-12, Vol.11 (12), p.1913

2019

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ChIP-Atlas 2021 update: a data-mining suite for exploring epigenomic landscapes by fully integrating ChIP-seq, ATAC-seq and Bisulfite-seq data

Lipase/Oxovanadium Co-Catalyzed Dynamic Kinetic Resolution of Propargyl Alcohols: Competition between Racemization and Rearrangement

Epigenetic landscape of drug responses revealed through large-scale ChIP-seq data analyses

Epiblast ground state is controlled by canonical Wnt/β-catenin signaling in the postimplantation mouse embryo and epiblast stem cells

High-depth spatial transcriptome analysis by photo-isolation chemistry

TRANSDIRE: data-driven direct reprogramming by a pioneer factor-guided trans-omics approach

FTO Demethylates Cyclin D1 mRNA and Controls Cell-Cycle Progression

Paternal age affects offspring via an epigenetic mechanism involving REST/NRSF

A defined glycosylation regulatory network modulates total glycome dynamics during pluripotency state transition

ChIP-seq analysis of genomic binding regions of five major transcription factors highlights a central role for ZIC2 in the mouse epiblast stem cell gene regulatory network

Effect of murine double‐minute 2 inhibitors in preclinical models of advanced clear cell carcinomas originating from ovaries and kidneys

A novel role of helix‐loop‐helix transcriptional factor Bhlhe40 in osteoclast activation

DDBJ Data Analysis Challenge: a machine learning competition to predict Arabidopsis chromatin feature annotations from DNA sequences

Detection of REST expression in the testis using epitope‐tag knock‐in mice generated by genome editing

Chd2 regulates chromatin for proper gene expression toward differentiation in mouse embryonic stem cells

Wnt signaling regulates left–right axis formation in the node of mouse embryos

Prognostic outcome of cervical laser ablation using a holmium yttrium-aluminum-garnet (Ho:YAG) laser for the treatment of cervical intraepithelial neoplasia: A single-center retrospective study

SraTailor: Graphical user interface software for processing and visualizing ChIP‐seq data

Elucidating disease-associated mechanisms triggered by pollutants via the epigenetic landscape using large-scale ChIP-Seq data

Argininosuccinate Synthase 1-Deficiency Enhances the Cell Sensitivity to Arginine through Decreased DEPTOR Expression in Endometrial Cancer

Hyperglycemia impairs left–right axis formation and thereby disturbs heart morphogenesis in mouse embryos

Regulome-based characterization of drug activity across the human diseasome

Cis‐control of Six1 expression in neural crest cells during craniofacial development

Significance of survivin as a prognostic factor and a therapeutic target in endometrial cancer

Anti-Tumor Effect of Inhibition of DNA Damage Response Proteins, ATM and ATR, in Endometrial Cancer Cells

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