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The center for expanded data annotation and retrieval

Journal of the American Medical Informatics Association : JAMIA, 2015-11, Vol.22 (6), p.1148-1152

2015

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The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories

Frontiers in immunology, 2018-08, Vol.9, p.1877-1877

2018

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Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations

AMIA ... Annual Symposium proceedings, 2017, Vol.2017, p.1272-1281

2017

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Unleashing the value of Common Data Elements through the CEDAR Workbench

AMIA ... Annual Symposium proceedings, 2019, Vol.2019, p.681-690

2019

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Adaptive System for Collaborative Online Laboratories

IEEE intelligent systems, 2012-07, Vol.27 (4), p.11-17

2012

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Clustering rule bases using ontology-based similarity measures

Web semantics, 2014-03, Vol.25, p.1-8

2014

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A semantic-based method for extracting concept definitions from scientific publications: evaluation in the autism phenotype domain

Journal of biomedical semantics, 2013-08, Vol.4 (1), p.14-14

2013

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NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation

Journal of biomedical semantics, 2017-06, Vol.8 (1), p.21-21, Article 21

2017

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Modeling community standards for metadata as templates makes data FAIR

Scientific data, 2022-11, Vol.9 (1), p.696-15, Article 696

2022

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The CEDAR Workbench: An Ontology-Assisted Environment for Authoring Metadata that Describe Scientific Experiments

The Semantic Web - ISWC 2017, 2017, Vol.10588, p.103-110

2017

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Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases

Database : the journal of biological databases and curation, 2019, Vol.2019

2019

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Evaluation of semantic-based information retrieval methods in the autism phenotype domain

AMIA ... Annual Symposium proceedings, 2011, Vol.2011, p.569-577

2011

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Automated Tracking of Quantitative Assessments of Tumor Burden in Clinical Trials

Translational oncology, 2014-02, Vol.7 (1), p.23-35

2014

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Semantic reasoning with image annotations for tumor assessment

AMIA ... Annual Symposium proceedings, 2009-11, Vol.2009, p.359-363

2009

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A Method for Representing and Querying Temporal Information in OWL

Biomedical Engineering Systems and Technologies, 2011, p.97-110

2011

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Software-engineering challenges of building and deploying reusable problem solvers

AI EDAM, 2009-11, Vol.23 (4), p.339-356

2009

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An ontology-driven method for hierarchical mining of temporal patterns: application to HIV drug resistance research

AMIA ... Annual Symposium proceedings, 2007-10, Vol.2007, p.614-619

2007

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A Bayesian network model for analysis of detection performance in surveillance systems

AMIA ... Annual Symposium proceedings, 2009-11, Vol.2009, p.276-280

2009

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Knowledge-data integration for temporal reasoning in a clinical trial system

International journal of medical informatics (Shannon, Ireland), 2009-04, Vol.78, p.S77-S85

2009

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Translating research into practice: organizational issues in implementing automated decision support for hypertension in three medical centers

Journal of the American Medical Informatics Association : JAMIA, 2004-09, Vol.11 (5), p.368-376

2004

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Ontology-driven mapping of temporal data in biomedical databases

AMIA ... Annual Symposium proceedings, 2006, Vol.2006, p.1045-1045

2006

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Semantic reasoning with XML-based biomedical information models

Studies in health technology and informatics, 2010, Vol.160 (Pt 2), p.986

2010

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A dynamic distributed architecture for temporal data abstraction

AMIA ... Annual Symposium proceedings, 2006, Vol.2006, p.880-880

2006

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A Framework for the Automatic Extraction of Rules from Online Text

Rule-Based Reasoning, Programming, and Applications, 2011, p.266-280

2011

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BioSTORM: a system for automated surveillance of diverse data sources

AMIA ... Annual Symposium proceedings, 2003, Vol.2003, p.1071-1071

2003

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The center for expanded data annotation and retrieval

The CAIRR Pipeline for Submitting Standards-Compliant B and T Cell Receptor Repertoire Sequencing Studies to the National Center for Biotechnology Information Repositories

Fast and Accurate Metadata Authoring Using Ontology-Based Recommendations

Unleashing the value of Common Data Elements through the CEDAR Workbench

Adaptive System for Collaborative Online Laboratories

Clustering rule bases using ontology-based similarity measures

A semantic-based method for extracting concept definitions from scientific publications: evaluation in the autism phenotype domain

NCBO Ontology Recommender 2.0: an enhanced approach for biomedical ontology recommendation

Modeling community standards for metadata as templates makes data FAIR

The CEDAR Workbench: An Ontology-Assisted Environment for Authoring Metadata that Describe Scientific Experiments

Using association rule mining and ontologies to generate metadata recommendations from multiple biomedical databases

Evaluation of semantic-based information retrieval methods in the autism phenotype domain

Automated Tracking of Quantitative Assessments of Tumor Burden in Clinical Trials

Semantic reasoning with image annotations for tumor assessment

A Method for Representing and Querying Temporal Information in OWL

Software-engineering challenges of building and deploying reusable problem solvers

An ontology-driven method for hierarchical mining of temporal patterns: application to HIV drug resistance research

A Bayesian network model for analysis of detection performance in surveillance systems

Knowledge-data integration for temporal reasoning in a clinical trial system

Translating research into practice: organizational issues in implementing automated decision support for hypertension in three medical centers

Ontology-driven mapping of temporal data in biomedical databases

Semantic reasoning with XML-based biomedical information models

A dynamic distributed architecture for temporal data abstraction

A Framework for the Automatic Extraction of Rules from Online Text

BioSTORM: a system for automated surveillance of diverse data sources

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