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Mechanisms of the tRNA wobble cytidine modification essential for AUA codon decoding in prokaryotes

Bioscience, Biotechnology, and Biochemistry, 2015-03, Vol.79 (3), p.347-353

Numata, Tomoyuki

2015

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Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog

Molecular cell, 2015-05, Vol.58 (3), p.418-430

2015

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A chemical probe based on the PreQ1 metabolite enables transcriptome-wide mapping of binding sites

Nature communications, 2021-10, Vol.12 (1), p.5856-5856, Article 5856

2021

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Crystal Structures of Csm2 and Csm3 in the Type III-A CRISPR–Cas Effector Complex

Journal of molecular biology, 2019-02, Vol.431 (4), p.748-763

2019

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Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri

Plant molecular biology, 2017-01, Vol.93 (1-2), p.97-108

2017

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Crystal Structure of the Cmr2–Cmr3 Subcomplex in the CRISPR–Cas RNA Silencing Effector Complex

Journal of molecular biology, 2013-10, Vol.425 (20), p.3811-3823

2013

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Modulation of the transglycosylation activity of plant family GH18 chitinase by removing or introducing a tryptophan side chain

FEBS letters, 2015-08, Vol.589 (18), p.2327-2333

2015

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Crystal Structure of the Csm3–Csm4 Subcomplex in the Type III-A CRISPR–Cas Interference Complex

Journal of molecular biology, 2015-01, Vol.427 (2), p.259-273

2015

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Structure and Enzymatic Properties of a Two-Domain Family GH19 Chitinase from Japanese Cedar (Cryptomeria japonica) Pollen

Journal of agricultural and food chemistry, 2018-06, Vol.66 (22), p.5699-5706

2018

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Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase

Biochemical journal, 2016-04, Vol.473 (8), p.1085-1095

2016

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Complete subsite mapping of a “loopful” GH19 chitinase from rye seeds based on its crystal structure

FEBS letters, 2013-08, Vol.587 (16), p.2691-2697

2013

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Synthetic ligands for PreQ1 riboswitches provide structural and mechanistic insights into targeting RNA tertiary structure

Nature communications, 2019-04, Vol.10 (1), p.1501-1501, Article 1501

2019

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Snapshots of tRNA sulphuration via an adenylated intermediate

Nature, 2006-07, Vol.442 (7101), p.419-424

2006

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Crystal structure and thermodynamic dissection of chitin oligosaccharide binding to the LysM module of chitinase-A from Pteris ryukyuensis

Biochemical and biophysical research communications, 2017-12, Vol.494 (3-4), p.736-741

2017

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Genetic and Biochemical Characterizations of aLhr1 Helicase in the Thermophilic Crenarchaeon Sulfolobus acidocaldarius

Catalysts, 2022-01, Vol.12 (1), p.34

2022

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A class III chitinase without disulfide bonds from the fern, Pteris ryukyuensis: crystal structure and ligand-binding studies

Planta, 2015-10, Vol.242 (4), p.895-907

2015

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Crystal structure and chitin oligosaccharide‐binding mode of a ‘loopful’ family GH19 chitinase from rye, Secale cereale, seeds

The FEBS journal, 2012-10, Vol.279 (19), p.3639-3651

2012

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Crystal structures and inhibitor binding properties of plant class V chitinases: the cycad enzyme exhibits unique structural and functional features

The Plant journal : for cell and molecular biology, 2015-04, Vol.82 (1), p.54-66

2015

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Mechanism for the definition of elongation and termination by the class II CCA-adding enzyme

The EMBO journal, 2009-11, Vol.28 (21), p.3353-3365

2009

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A class V chitinase from Arabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis

Planta, 2011-07, Vol.234 (1), p.123-137

2011

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Mechanism for the Alteration of the Substrate Specificities of Template-Independent RNA Polymerases

Structure (London), 2011-02, Vol.19 (2), p.232-243

2011

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Structural basis of tRNA agmatinylation essential for AUA codon decoding

Nature structural & molecular biology, 2011-11, Vol.18 (11), p.1275

2011

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Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum

Plant molecular biology, 2011-02, Vol.75 (3), p.291-304

2011

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Crystallization and preliminary X-ray diffraction analysis of the CRISPR-Cas RNA-silencing Cmr complex

Acta crystallographica. Section F, Structural biology communications, 2015-06, Vol.71 (6), p.735-740

2015

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Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme

The EMBO journal, 2008-07, Vol.27 (14), p.1944-1952

2008

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Mechanisms of the tRNA wobble cytidine modification essential for AUA codon decoding in prokaryotes

Crystal structure of the CRISPR-Cas RNA silencing Cmr complex bound to a target analog

A chemical probe based on the PreQ1 metabolite enables transcriptome-wide mapping of binding sites

Crystal Structures of Csm2 and Csm3 in the Type III-A CRISPR–Cas Effector Complex

Chitin oligosaccharide binding to the lysin motif of a novel type of chitinase from the multicellular green alga, Volvox carteri

Crystal Structure of the Cmr2–Cmr3 Subcomplex in the CRISPR–Cas RNA Silencing Effector Complex

Modulation of the transglycosylation activity of plant family GH18 chitinase by removing or introducing a tryptophan side chain

Crystal Structure of the Csm3–Csm4 Subcomplex in the Type III-A CRISPR–Cas Interference Complex

Structure and Enzymatic Properties of a Two-Domain Family GH19 Chitinase from Japanese Cedar (Cryptomeria japonica) Pollen

Mechanism of chitosan recognition by CBM32 carbohydrate-binding modules from a Paenibacillus sp. IK-5 chitosanase/glucanase

Complete subsite mapping of a “loopful” GH19 chitinase from rye seeds based on its crystal structure

Synthetic ligands for PreQ1 riboswitches provide structural and mechanistic insights into targeting RNA tertiary structure

Snapshots of tRNA sulphuration via an adenylated intermediate

Crystal structure and thermodynamic dissection of chitin oligosaccharide binding to the LysM module of chitinase-A from Pteris ryukyuensis

Genetic and Biochemical Characterizations of aLhr1 Helicase in the Thermophilic Crenarchaeon Sulfolobus acidocaldarius

A class III chitinase without disulfide bonds from the fern, Pteris ryukyuensis: crystal structure and ligand-binding studies

Crystal structure and chitin oligosaccharide‐binding mode of a ‘loopful’ family GH19 chitinase from rye, Secale cereale, seeds

Crystal structures and inhibitor binding properties of plant class V chitinases: the cycad enzyme exhibits unique structural and functional features

Mechanism for the definition of elongation and termination by the class II CCA-adding enzyme

A class V chitinase from Arabidopsis thaliana: gene responses, enzymatic properties, and crystallographic analysis

Mechanism for the Alteration of the Substrate Specificities of Template-Independent RNA Polymerases

Structural basis of tRNA agmatinylation essential for AUA codon decoding

Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum

Crystallization and preliminary X-ray diffraction analysis of the CRISPR-Cas RNA-silencing Cmr complex

Molecular basis for maintenance of fidelity during the CCA-adding reaction by a CCA-adding enzyme

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